RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 TDGQ13569 410 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 ARSHQ5FYA8 562 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 PRSS33Q8NF86 280 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 CNTN3Q9P232 1028 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 IGSF9Q9P2J2 1179 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 ANKFY1Q9P2R3 1169 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 ODF2LQ9ULJ1 636 aa24.88■■□□□ 1.57
CHD4-214ENST00000545942 NPHP3-ACAD11A0A0J9YXS1 232 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 HARSP12081 509 aaKnown RBP24.87■■□□□ 1.57
CHD4-214ENST00000545942 KCNE1P15382 129 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 PDCP20941 246 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 CACNB1Q02641 598 aaPredicted RBP24.87■■□□□ 1.57
CHD4-214ENST00000545942 NOLC1Q14978 699 aaKnown RBP eCLIP24.87■■□□□ 1.57
CHD4-214ENST00000545942 SF3A1Q15459 793 aaKnown RBP24.87■■□□□ 1.57
CHD4-214ENST00000545942 LIN9Q5TKA1 542 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 CD300LGQ6UXG3 332 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 ZPBP2Q6X784 338 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 C3orf58Q8NDZ4 430 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 ZBTB45Q96K62 511 aaPredicted RBP24.87■■□□□ 1.57
CHD4-214ENST00000545942 ZMAT2Q96NC0 199 aaKnown RBP24.87■■□□□ 1.57
CHD4-214ENST00000545942 EPS15L1Q9UBC2 864 aa24.87■■□□□ 1.57
CHD4-214ENST00000545942 VPS37CA5D8V6 355 aaPredicted RBP24.86■■□□□ 1.57
CHD4-214ENST00000545942 ADAM12O43184 909 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 PTPN5P54829 565 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 RASSF8Q8NHQ8 419 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.86■■□□□ 1.57
CHD4-214ENST00000545942 MTRRQ9UBK8 725 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 PODXLO00592 558 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 CLDN3O15551 220 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 C8AP07357 584 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 HNRNPA1P09651 372 aaKnown RBP eCLIP24.86■■□□□ 1.57
CHD4-214ENST00000545942 TKTP29401 623 aaKnown RBP24.86■■□□□ 1.57
CHD4-214ENST00000545942 OR1D2P34982 312 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 NCKAP1LP55160 1127 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 RAB33AQ14088 237 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 ANKS3Q6ZW76 656 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 GPBP1Q86WP2 473 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 MYADMQ96S97 322 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 REEP2Q9BRK0 252 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 DUSP12Q9UNI6 340 aa24.86■■□□□ 1.57
CHD4-214ENST00000545942 MYO10Q9HD67 2058 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 I3L4J1 428 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 HOXA9P31269 272 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 RPL9P32969 192 aaKnown RBP24.85■■□□□ 1.57
CHD4-214ENST00000545942 BRCC3P46736 316 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 GRIN1Q05586 938 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 MCL1Q07820 350 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 DHX8Q14562 1220 aaKnown RBP24.85■■□□□ 1.57
CHD4-214ENST00000545942 PPM1LQ5SGD2 360 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 HAUS6Q7Z4H7 955 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 LRRC15Q8TF66 581 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 KCNN1Q92952 543 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 MFSD1Q9H3U5 465 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 BLOC1S4Q9NUP1 217 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 BACE2Q9Y5Z0 518 aa24.85■■□□□ 1.57
CHD4-214ENST00000545942 ZDBF2Q9HCK1 2354 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 MEFVO15553 781 aaPredicted RBP24.84■■□□□ 1.57
CHD4-214ENST00000545942 PLCG1P19174 1290 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 SCP2P22307 547 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 MATR3P43243 847 aaKnown RBP eCLIP24.84■■□□□ 1.572e-6■■■■□ 22.9
CHD4-214ENST00000545942 NUBP1P53384 320 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 KARSQ15046 597 aaKnown RBP24.84■■□□□ 1.57
CHD4-214ENST00000545942 GET4Q7L5D6 327 aaPredicted RBP24.84■■□□□ 1.57
CHD4-214ENST00000545942 ALYREFQ86V81 257 aaKnown RBP24.84■■□□□ 1.57
CHD4-214ENST00000545942 RAD54LQ92698 747 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 NXPE3Q969Y0 559 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 BICD1Q96G01 975 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 CDY1Q9Y6F8 540 aa24.84■■□□□ 1.57
CHD4-214ENST00000545942 XYLBO75191 536 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 FAM13AO94988 1023 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 TCF15Q12870 199 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 MCM6Q14566 821 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 UVSSAQ2YD98 709 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 SLC10A6Q3KNW5 377 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 SEZ6Q53EL9 994 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 AXDND1Q5T1B0 1012 aaPredicted RBP24.83■■□□□ 1.56
CHD4-214ENST00000545942 GRASPQ7Z6J2 395 aaPredicted RBP24.83■■□□□ 1.56
CHD4-214ENST00000545942 MYCT1Q8N699 235 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 SLC7A14Q8TBB6 771 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 RSAD2Q8WXG1 361 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 C18orf25Q96B23 403 aaPredicted RBP24.83■■□□□ 1.56
CHD4-214ENST00000545942 PARVGQ9HBI0 331 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 NUB1Q9Y5A7 615 aa24.83■■□□□ 1.56
CHD4-214ENST00000545942 KMT2EQ8IZD2 1858 aa24.82■■□□□ 1.56
CHD4-214ENST00000545942 MTCL1Q9Y4B5 1905 aaKnown RBP24.82■■□□□ 1.56
CHD4-214ENST00000545942 KRT18P05783 430 aaKnown RBP24.82■■□□□ 1.56
CHD4-214ENST00000545942 LAMP2P13473 410 aa24.82■■□□□ 1.56
CHD4-214ENST00000545942 FSHRP23945 695 aa24.82■■□□□ 1.56
CHD4-214ENST00000545942 ZNF131P52739 623 aa24.82■■□□□ 1.56
CHD4-214ENST00000545942 RSPO2Q6UXX9 243 aaPredicted RBP24.82■■□□□ 1.56
CHD4-214ENST00000545942 RTL10Q7L3V2 364 aa24.82■■□□□ 1.56
CHD4-214ENST00000545942 PLEKHA5Q9HAU0 1116 aa24.82■■□□□ 1.56
CHD4-214ENST00000545942 K7ENM7 598 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 SYN3O14994 580 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 CCL16O15467 120 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 POU2F2P09086 479 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 CLTAP09496 248 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 LIG4P49917 911 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 MRE11P49959 708 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 ASTLQ6HA08 431 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms