RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 TSG101Q99816 390 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 ADAM2Q99965 735 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 TCHPQ9BT92 498 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
LTBR-214ENST00000545445 KCTD10Q9H3F6 313 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 PDZD7Q9H5P4 517 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 TRAF3IP3Q9Y228 551 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 A0A0U1RQF3 1178 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 PER2O15055 1255 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
LTBR-214ENST00000545445 EOMESO95936 686 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 LDHAP00338 332 aaKnown RBP12.91□□□□□ -0.34
LTBR-214ENST00000545445 EDN1P05305 212 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 RPL13P26373 211 aaKnown RBP12.91□□□□□ -0.34
LTBR-214ENST00000545445 HOXD13P35453 343 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 GATMP50440 423 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 FAM189BP81408 668 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
LTBR-214ENST00000545445 LRRC63Q05C16 580 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
LTBR-214ENST00000545445 NFIL3Q16649 462 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 ZSCAN23Q3MJ62 389 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 ZNF568Q3ZCX4 644 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 CENPPQ6IPU0 288 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 ZBTB33Q86T24 672 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 SMYD4Q8IYR2 804 aaPredicted RBP12.91□□□□□ -0.34
LTBR-214ENST00000545445 CMTR2Q8IYT2 770 aaKnown RBP12.91□□□□□ -0.34
LTBR-214ENST00000545445 RSPH1Q8WYR4 309 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 POMGNT1Q8WZA1 660 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 SUSD6Q92537 303 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 ELAC1Q9H777 363 aaKnown RBP12.91□□□□□ -0.34
LTBR-214ENST00000545445 TLE6Q9H808 572 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 FAM105AQ9NUU6 356 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 MAPK8IP1Q9UQF2 711 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 DCHS1Q96JQ0 3298 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 VPS13AQ96RL7 3174 aa12.91□□□□□ -0.34
LTBR-214ENST00000545445 A0A0B4J269 797 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 TTLL13PA6NNM8 815 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 C9IYK1 514 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 ANKRD63C9JTQ0 380 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 ABLIM1O14639 778 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 TGFB1I1O43294 461 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 MGEA5O60502 916 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 CAVIN2O95810 425 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
LTBR-214ENST00000545445 CCNE1P24864 410 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 ERCC5P28715 1186 aaPredicted RBP12.9□□□□□ -0.34
LTBR-214ENST00000545445 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
LTBR-214ENST00000545445 TYRO3Q06418 890 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 PAK1Q13153 545 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 SLC39A4Q6P5W5 647 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 SLC9A9Q8IVB4 645 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 PGBD4Q96DM1 585 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 NAT10Q9H0A0 1025 aaKnown RBP12.9□□□□□ -0.34
LTBR-214ENST00000545445 UBN1Q9NPG3 1134 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 ANKFY1Q9P2R3 1169 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 ZMYM2Q9UBW7 1377 aa12.9□□□□□ -0.34
LTBR-214ENST00000545445 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
LTBR-214ENST00000545445 SYCE3A1L190 88 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 OGTO15294 1046 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 NPTXRO95502 500 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 STAG3L1P0CL83 205 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 ATF7P17544 494 aaPredicted RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 ADSSP30520 456 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 GRM5P41594 1212 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 FKBP3Q00688 224 aaKnown RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 ZCWPW2Q504Y3 356 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 UBXN11Q5T124 520 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 EEF1DP3Q658K8 133 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 ERMP1Q7Z2K6 904 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 MRPL10Q7Z7H8 261 aaKnown RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 RTN4RL1Q86UN2 441 aaPredicted RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 ECHDC2Q86YB7 292 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 NPAS4Q8IUM7 802 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 TMEM105Q8N8V8 129 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 MICAL1Q8TDZ2 1067 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 ZBTB45Q96K62 511 aaPredicted RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 RIPOR3Q96MK2 946 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 CDT1Q9H211 546 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 TMEM161AQ9NX61 479 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
LTBR-214ENST00000545445 USP20Q9Y2K6 914 aa12.89□□□□□ -0.35
LTBR-214ENST00000545445 KIAA1671Q9BY89 1806 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 HOXA2O43364 376 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms