RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 TANGO2Q6ICL3 276 aa17.11■□□□□ 0.33
CD4-212ENST00000544344 CPLX2Q6PUV4 134 aaKnown RBP17.11■□□□□ 0.33
CD4-212ENST00000544344 ZNF852Q6ZMS4 543 aa17.11■□□□□ 0.33
CD4-212ENST00000544344 RTL10Q7L3V2 364 aa17.11■□□□□ 0.33
CD4-212ENST00000544344 AVENQ9NQS1 362 aaPredicted RBP17.11■□□□□ 0.33
CD4-212ENST00000544344 GDE1Q9NZC3 331 aa17.11■□□□□ 0.33
CD4-212ENST00000544344 CDV3Q9UKY7 258 aaKnown RBP17.11■□□□□ 0.33
CD4-212ENST00000544344 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
CD4-212ENST00000544344 MRPS23Q9Y3D9 190 aaKnown RBP17.11■□□□□ 0.33
CD4-212ENST00000544344 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
CD4-212ENST00000544344 CDY1Q9Y6F8 540 aa17.11■□□□□ 0.33
CD4-212ENST00000544344 ZFHX4Q86UP3 3567 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 TMEM189-UBE2V1I3L0A0 370 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 WNT7AO00755 349 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 RHOP08100 348 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 CEBPBP17676 345 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 NR5A1Q13285 461 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
CD4-212ENST00000544344 ELSPBP1Q96BH3 223 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 RTKNQ9BST9 563 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 FAM126AQ9BYI3 521 aaPredicted RBP17.1■□□□□ 0.33
CD4-212ENST00000544344 BACE2Q9Y5Z0 518 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 USP24Q9UPU5 2620 aa17.1■□□□□ 0.33
CD4-212ENST00000544344 N4BP3O15049 544 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 NCAM2O15394 837 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 SPATA31C1P0DKV0 1188 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
CD4-212ENST00000544344 PRSS36Q5K4E3 855 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 EEF1DP3Q658K8 133 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 MAMSTRQ6ZN01 415 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 DNASE1L2Q92874 299 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 DDX27Q96GQ7 796 aaKnown RBP17.09■□□□□ 0.33
CD4-212ENST00000544344 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
CD4-212ENST00000544344 TM6SF1Q9BZW5 370 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 CHRDQ9H2X0 955 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
CD4-212ENST00000544344 USP18Q9UMW8 372 aa17.09■□□□□ 0.33
CD4-212ENST00000544344 ARHGEF37A1IGU5 675 aa17.08■□□□□ 0.32
CD4-212ENST00000544344 REC8O95072 547 aa17.08■□□□□ 0.32
CD4-212ENST00000544344 TKTP29401 623 aaKnown RBP17.08■□□□□ 0.32
CD4-212ENST00000544344 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.32
CD4-212ENST00000544344 CLCNKBP51801 687 aa17.08■□□□□ 0.32
CD4-212ENST00000544344 UPP1Q16831 310 aa17.08■□□□□ 0.32
CD4-212ENST00000544344 MTMR9Q96QG7 549 aa17.08■□□□□ 0.32
CD4-212ENST00000544344 MRPS17Q9Y2R5 130 aaKnown RBP17.08■□□□□ 0.32
CD4-212ENST00000544344 CFAP47Q6ZTR5 3102 aa17.08■□□□□ 0.32
CD4-212ENST00000544344 TICRRQ7Z2Z1 1910 aa17.08■□□□□ 0.32
CD4-212ENST00000544344 I3L4J1 428 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 ACKR2O00590 384 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 B3GAT3O94766 335 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 ABLIM3O94929 683 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 ADRB1P08588 477 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 PRPF4BQ13523 1007 aaKnown RBP17.07■□□□□ 0.32
CD4-212ENST00000544344 CALCRLQ16602 461 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 FAM78AQ5JUQ0 283 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 GLRA4Q5JXX5 417 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 SLC8B1Q6J4K2 584 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 ZBTB8OSQ8IWT0 167 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 ZNF461Q8TAF7 563 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 TCEAL4Q96EI5 215 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 CCDC43Q96MW1 224 aaKnown RBP17.07■□□□□ 0.32
CD4-212ENST00000544344 GOLGA2P5Q9HBQ8 144 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 NDRG2Q9UN36 371 aaKnown RBP17.07■□□□□ 0.32
CD4-212ENST00000544344 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
CD4-212ENST00000544344 CHD6Q8TD26 2715 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 CDKL5O76039 1030 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 PRKCBP05771 671 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
CD4-212ENST00000544344 PTPN2P17706 415 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 XBP1P17861 261 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 CCR2P41597 374 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 TXKP42681 527 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 BRCC3P46736 316 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 ROR1Q01973 937 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 SPEM2Q0P670 501 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 GRM2Q14416 872 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 LPAL2Q16609 132 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 ANKS3Q6ZW76 656 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 MAP4K3Q8IVH8 894 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 GMEB2Q9UKD1 530 aa17.06■□□□□ 0.32
CD4-212ENST00000544344 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.06■□□□□ 0.32
CD4-212ENST00000544344 WDR27A2RRH5 827 aa17.05■□□□□ 0.32
CD4-212ENST00000544344 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
CD4-212ENST00000544344 PFKFB2O60825 505 aa17.05■□□□□ 0.32
CD4-212ENST00000544344 MED24O75448 989 aa17.05■□□□□ 0.32
CD4-212ENST00000544344 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
CD4-212ENST00000544344 KRT2P35908 639 aa17.05■□□□□ 0.32
CD4-212ENST00000544344 SOX4Q06945 474 aaPredicted RBP17.05■□□□□ 0.32
CD4-212ENST00000544344 MAPK6Q16659 721 aa17.05■□□□□ 0.32
CD4-212ENST00000544344 LAIR1Q6GTX8 287 aa17.05■□□□□ 0.32
CD4-212ENST00000544344 CATSPER3Q86XQ3 398 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms