RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 NFICP08651 508 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DLATP10515 647 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 LAG3P18627 525 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ALDH7A1P49419 539 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 C11orf57Q6ZUT1 292 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TSPAN18Q96SJ8 248 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 NAT10Q9H0A0 1025 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DNAJB4Q9UDY4 337 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MTUS1Q9ULD2 1270 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 RWDD3Q9Y3V2 267 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MAPK13O15264 365 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 KRT13P13646 458 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CTNNB1P35222 781 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 OR1G1P47890 313 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 WNT7BP56706 349 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 BCAR1P56945 870 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TFAMQ00059 246 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TAP1Q03518 808 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TUSC3Q13454 348 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PSMD6Q15008 389 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ANO6Q4KMQ2 910 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 USP37Q86T82 979 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ZC3H3Q8IXZ2 948 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 COLGALT2Q8IYK4 626 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 C18orf25Q96B23 403 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MFSD14AQ96MC6 490 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CEP63Q96MT8 703 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ZNF558Q96NG5 402 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TGS1Q96RS0 853 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MKNK1Q9BUB5 465 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SRRTQ9BXP5 876 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 UBQLN1Q9UMX0 589 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DERAQ9Y315 318 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 C2CD2Q9Y426 696 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PCDHB12Q9Y5F1 795 aa15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 RANBP2P49792 3224 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SLC16A3O15427 465 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ARHGEF15O94989 841 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ALDH2P05091 517 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TMEM191BP0C7N4 346 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TNNI1P19237 187 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PBX3P40426 434 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DSC1Q08554 894 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CCDC40Q4G0X9 1142 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 LMBRD2Q68DH5 695 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 INTS8Q75QN2 995 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 NT5DC4Q86YG4 428 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CREBRFQ8IUR6 639 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 COLGALT1Q8NBJ5 622 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CACTINQ8WUQ7 758 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CLP1Q92989 425 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TMEM175Q9BSA9 504 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 C17orf80Q9BSJ5 609 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CERS4Q9HA82 394 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 GOLGA2P5Q9HBQ8 144 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TUBGCP4Q9UGJ1 667 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FAN1Q9Y2M0 1017 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 NT5C1B-RDH14C9J2C7 533 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SOX1O00570 391 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 B4GALT3O60512 393 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TNNC2P02585 160 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SLC11A1P49279 550 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 VAMP7P51809 220 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SOX4Q06945 474 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 NAB2Q15742 525 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ZBTB6Q15916 424 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 HABP4Q5JVS0 413 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 KCNT2Q6UVM3 1135 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FILIP1Q7Z7B0 1213 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 WDR49Q8IV35 697 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 EFCAB13Q8IY85 973 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 RABGGTAQ92696 567 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ANKRD36BP1Q96IX9 119 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SAMD11Q96NU1 681 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MED15Q96RN5 788 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 POP1Q99575 1024 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FUCA2Q9BTY2 467 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DPP3Q9NY33 737 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CACNG4Q9UBN1 327 aa15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PRG3Q9Y2Y8 225 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CARNS1A5YM72 827 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 NRP1O14786 923 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 GNA14O95837 355 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 GALTP07902 379 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 LINC00271P0C7V0 271 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CYP3A5P20815 502 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 BMPR1AP36894 532 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 GUCY2FP51841 1108 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 BFSP1Q12934 665 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 EPC2Q52LR7 807 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SPRED2Q7Z698 418 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PARD3BQ8TEW8 1205 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 LRCH3Q96II8 777 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 UROC1Q96N76 676 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CGRRF1Q99675 332 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PAAF1Q9BRP4 392 aa15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MTMR12Q9C0I1 747 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms