RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 TARBP2Q15633 366 aaKnown RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 KCTD16Q68DU8 428 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 NCAPG2Q86XI2 1143 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 SH2D3CQ8N5H7 860 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 TARS2Q9BW92 718 aaKnown RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.91□□□□□ -0.02
MSH2-206ENST00000543555 RBAKQ9NYW8 714 aaPredicted RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 CNOT8Q9UFF9 292 aaKnown RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 PTPRFP10586 1907 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 SIP14410 1827 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 GGPS1O95749 300 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 CPNE8Q86YQ8 564 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 ERP44Q9BS26 406 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 CAPS2Q9BXY5 557 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 GPBP1L1Q9HC44 474 aaPredicted RBP14.9□□□□□ -0.02
MSH2-206ENST00000543555 NRBP2Q9NSY0 501 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 PCDHA3Q9Y5H8 950 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 LDHAP00338 332 aaKnown RBP14.9□□□□□ -0.02
MSH2-206ENST00000543555 EDN1P05305 212 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 PYGMP11217 842 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 UNGP13051 313 aaPredicted RBP14.9□□□□□ -0.02
MSH2-206ENST00000543555 BIRC3Q13489 604 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 NEDD9Q14511 834 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 DUPD1Q68J44 220 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 GADL1Q6ZQY3 521 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 ZNF677Q86XU0 584 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 PRELID2Q8N945 189 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 GLG1Q92896 1179 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 MSTO1Q9BUK6 570 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 TRIM31Q9BZY9 425 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 TMEM134Q9H6X4 195 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 ANKFY1Q9P2R3 1169 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 PCDHB2Q9Y5E7 798 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 ZNFX1Q9P2E3 1918 aaKnown RBP14.9□□□□□ -0.02
MSH2-206ENST00000543555 PAPPA2Q9BXP8 1791 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 A0A0B4J269 797 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 H0YGN5 161 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 VNN1O95497 513 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 CHRNA3P32297 505 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 IREB2P48200 963 aaKnown RBP14.9□□□□□ -0.02
MSH2-206ENST00000543555 IRAK1P51617 712 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 STAT5BP51692 787 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 MTMR3Q13615 1198 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 DNAJC21Q5F1R6 531 aaKnown RBP14.9□□□□□ -0.02
MSH2-206ENST00000543555 ZBTB41Q5SVQ8 909 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 CEP85LQ5SZL2 805 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 FAM160B1Q5W0V3 765 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 TMC3Q7Z5M5 1100 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 NFS1Q9Y697 457 aa14.9□□□□□ -0.02
MSH2-206ENST00000543555 CAPSQ13938 189 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 SPOPLQ6IQ16 392 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 ZDHHC14Q8IZN3 488 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 OPTNQ96CV9 577 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 ATP6V1G3Q96LB4 118 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 ADGRA2Q96PE1 1338 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 TGFB3P10600 412 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 BPIFB4P59827 614 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 CST9Q5W186 159 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 FOXR1Q6PIV2 292 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 C18orf8Q96DM3 657 aa14.89□□□□□ -0.03
MSH2-206ENST00000543555 ADCY3O60266 1144 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 ACO1P21399 889 aaKnown RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 TCF7P36402 384 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 PTGIRP43119 386 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 IRX3P78415 501 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 METTL7BQ6UX53 244 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 MCOLN2Q8IZK6 566 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 UBLCP1Q8WVY7 318 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 SEPT1Q8WYJ6 367 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 MAGOHBQ96A72 148 aaKnown RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 FMO2Q99518 471 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 CGRRF1Q99675 332 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 PAGR1Q9BTK6 254 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 TMBIM4Q9HC24 238 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 AVENQ9NQS1 362 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 PCYOX1Q9UHG3 505 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 RASAL2Q9UJF2 1139 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 A0A0G2JLL6 359 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 HMGB1P1B2RPK0 211 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 MAFO75444 373 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 RWDD2BP57060 319 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 GNGT1P63211 74 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 CUL2Q13617 745 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 KDM7AQ6ZMT4 941 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 PRRT2Q7Z6L0 340 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 SLC13A5Q86YT5 568 aaPredicted RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 APOBEC3GQ9HC16 384 aaKnown RBP14.88□□□□□ -0.03
MSH2-206ENST00000543555 ZDHHC18Q9NUE0 388 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 ANAPC7Q9UJX3 599 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 OTOFQ9HC10 1997 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 GRIN2DO15399 1336 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 CNTNAP2Q9UHC6 1331 aa14.88□□□□□ -0.03
MSH2-206ENST00000543555 GOLGA6L10A6NI86 522 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 PPFIA4O75335 1185 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 GJA5P36382 358 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 DRG2P55039 364 aaKnown RBP14.87□□□□□ -0.03
MSH2-206ENST00000543555 DHX9Q08211 1270 aaKnown RBP14.87□□□□□ -0.03
MSH2-206ENST00000543555 DRP2Q13474 957 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 CYP1B1Q16678 543 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms