RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 YARSP54577 528 aaKnown RBP13.22□□□□□ -0.29
PTPN6-220ENST00000543115 SLC12A3P55017 1021 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
PTPN6-220ENST00000543115 RAB33AQ14088 237 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 SEZ6Q53EL9 994 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 MPZL3Q6UWV2 235 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 SIX5Q8N196 739 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 SLC44A3Q8N4M1 653 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 DDX27Q96GQ7 796 aaKnown RBP13.22□□□□□ -0.29
PTPN6-220ENST00000543115 UROC1Q96N76 676 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 NTPCRQ9BSD7 190 aaKnown RBP13.22□□□□□ -0.29
PTPN6-220ENST00000543115 C17orf75Q9HAS0 396 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 RBM19Q9Y4C8 960 aaKnown RBP13.22□□□□□ -0.29
PTPN6-220ENST00000543115 CDY1Q9Y6F8 540 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 MYO10Q9HD67 2058 aa13.22□□□□□ -0.29
PTPN6-220ENST00000543115 KRBA1A5PL33 1030 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 CCL16O15467 120 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 HNRNPA1P09651 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 PLS3P13797 630 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 CLCN5P51795 746 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 NUBP1P53384 320 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 TMEM119Q4V9L6 283 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 ARSHQ5FYA8 562 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 PPM1LQ5SGD2 360 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 PDXDC1Q6P996 788 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 APBB1IPQ7Z5R6 666 aaPredicted RBP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 TMEM130Q8N3G9 435 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 TMEM161BQ8NDZ6 487 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 SLC7A14Q8TBB6 771 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 SPIRE2Q8WWL2 714 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 ATOH1Q92858 354 aaPredicted RBP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 C18orf25Q96B23 403 aaPredicted RBP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 TCHPQ9BT92 498 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 TIPINQ9BVW5 301 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 HAPLN2Q9GZV7 340 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 TOPORSQ9NS56 1045 aaPredicted RBP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 CNTN3Q9P232 1028 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.29
PTPN6-220ENST00000543115 FBXL21Q9UKT6 434 aa13.21□□□□□ -0.29
PTPN6-220ENST00000543115 VWA8A3KMH1 1905 aa13.21□□□□□ -0.3
PTPN6-220ENST00000543115 ZDBF2Q9HCK1 2354 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 ANHXE9PGG2 379 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 PODXLO00592 558 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 TOM1L1O75674 476 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
PTPN6-220ENST00000543115 KCNE1P15382 129 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 AOC1P19801 751 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 FSHRP23945 695 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 HOXA9P31269 272 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 GRIN1Q05586 938 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 HTR4Q13639 388 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 SLC10A6Q3KNW5 377 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 ARL6IP4Q66PJ3 421 aaKnown RBP13.2□□□□□ -0.3
PTPN6-220ENST00000543115 ITFG1Q8TB96 612 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 RPP25Q9BUL9 199 aaKnown RBP13.2□□□□□ -0.3
PTPN6-220ENST00000543115 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 ANKFY1Q9P2R3 1169 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 CA14Q9ULX7 337 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 POLIQ9UNA4 740 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 NUMBLQ9Y6R0 609 aa13.2□□□□□ -0.3
PTPN6-220ENST00000543115 SRFP11831 508 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 STRN3Q13033 797 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 NOLC1Q14978 699 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN6-220ENST00000543115 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
PTPN6-220ENST00000543115 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
PTPN6-220ENST00000543115 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 ANKS3Q6ZW76 656 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 GPR152Q8TDT2 470 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 FGF13Q92913 245 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 FGF14Q92915 247 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 NXPE3Q969Y0 559 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
PTPN6-220ENST00000543115 BLOC1S4Q9NUP1 217 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 SLC38A7Q9NVC3 462 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 DNMT3BQ9UBC3 853 aaKnown RBP13.19□□□□□ -0.3
PTPN6-220ENST00000543115 WNT16Q9UBV4 365 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
PTPN6-220ENST00000543115 MTCL1Q9Y4B5 1905 aaKnown RBP13.18□□□□□ -0.3
PTPN6-220ENST00000543115 WDR27A2RRH5 827 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 MCM2P49736 904 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 SMTNP53814 917 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 ROR1Q01973 937 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 SPAG1Q07617 926 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 MCL1Q07820 350 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 SLC8B1Q6J4K2 584 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 POTEHQ6S545 545 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms