RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 MYO1AQ9UBC5 1043 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 RAPGEFL1Q9UHV5 662 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 ACSL6Q9UKU0 697 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 ASAP1Q9ULH1 1129 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 ITIH6Q6UXX5 1313 aa4.61□□□□□ -1.67
SFSWAP-211ENST00000542813 SYT5O00445 386 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 CD4P01730 458 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 IFIT1P09914 478 aaKnown RBP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 ZGLP1P0C6A0 271 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 RAC2P15153 192 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 EN2P19622 333 aaPredicted RBP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 CAPN3P20807 821 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 FGFR2P21802 821 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 FOXO1Q12778 655 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 KIR3DS1Q14943 382 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 GJC2Q5T442 439 aaPredicted RBP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 VPS53Q5VIR6 699 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 CD276Q5ZPR3 534 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 GALNT15Q8N3T1 639 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 FAM26EQ8N5C1 309 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 ANKS4BQ8N8V4 417 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 GPR156Q8NFN8 814 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 C18orf8Q96DM3 657 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 SUCLG2Q96I99 432 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 MRGPRX4Q96LA9 322 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 DMRTA2Q96SC8 542 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 AMNQ9BXJ7 453 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 OSBPL5Q9H0X9 879 aaPredicted RBP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC39A2Q9NP94 309 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 OBP2BQ9NPH6 170 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 INCENPQ9NQS7 918 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 VPS45Q9NRW7 570 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 STK32BQ9NY57 414 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 KCMF1Q9P0J7 381 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 IFT80Q9P2H3 777 aaPredicted RBP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 AFF4Q9UHB7 1163 aaKnown RBP4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 NUDT5Q9UKK9 219 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC39A10Q9ULF5 831 aa4.6□□□□□ -1.67
SFSWAP-211ENST00000542813 NPC1O15118 1278 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 AKR1B10O60218 316 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 CUTAO60888 179 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SEC24DO94855 1032 aaPredicted RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 ENDOD1O94919 500 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SYN1P17600 705 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 APEX1P27695 318 aaKnown RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 ITGA8P53708 1063 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 HTRA4P83105 476 aaPredicted RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 MGAT5Q09328 741 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 ABCC8Q09428 1581 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 TARDBPQ13148 414 aaKnown RBP eCLIP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 RAB39AQ14964 217 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SNAPC4Q5SXM2 1469 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 TTLL5Q6EMB2 1281 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 JMJD6Q6NYC1 403 aaPredicted RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 LRSAM1Q6UWE0 723 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 TBC1D1Q86TI0 1168 aaPredicted RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 RSPH3Q86UC2 560 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 AMIGO3Q86WK7 504 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 FAM129CQ86XR2 697 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 CELF5Q8N6W0 485 aaKnown RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC30A5Q8TAD4 765 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 ABHD4Q8TB40 342 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 BRIX1Q8TDN6 353 aaKnown RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 HDAC2Q92769 488 aaKnown RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 IQCDQ96DY2 449 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 PEX11GQ96HA9 241 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 TMX3Q96JJ7 454 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 MRGPRX1Q96LB2 322 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 HEPHQ9BQS7 1158 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 EPB41L4BQ9H329 900 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 MANSC1Q9H8J5 431 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 RXFP1Q9HBX9 757 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 ALG13Q9NP73 1137 aaKnown RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 CD320Q9NPF0 282 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SERHLQ9NQF3 203 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SACM1LQ9NTJ5 587 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 GJB4Q9NTQ9 266 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 PIH1D1Q9NWS0 290 aaKnown RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SLAMF8Q9P0V8 285 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 COL20A1Q9P218 1284 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 HECW2Q9P2P5 1572 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 PCDHA6Q9UN73 950 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC45A1Q9Y2W3 748 aa4.59□□□□□ -1.67
SFSWAP-211ENST00000542813 DNMBPQ6XZF7 1577 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 MAGI1Q96QZ7 1491 aaPredicted RBP4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 NCANO14594 1321 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 A6NCN8 305 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 NPIPB6E9PJ23 425 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 TRIM38O00635 465 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 HNRNPDLO14979 420 aaKnown RBP4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 ARHGAP6O43182 974 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 TMEM127O75204 238 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 BAIAP3O94812 1187 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 MED14OSP0DP75 135 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 MALP21145 153 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 CNTFP26441 200 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms