RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 UNGP13051 313 aaPredicted RBP15.21■□□□□ 0.03
LDB3-207ENST00000542786 HOXD8P13378 290 aaPredicted RBP15.21■□□□□ 0.03
LDB3-207ENST00000542786 AARSP49588 968 aaKnown RBP eCLIP15.21■□□□□ 0.03
LDB3-207ENST00000542786 RNASE9P60153 205 aaKnown RBP15.21■□□□□ 0.03
LDB3-207ENST00000542786 PTENP60484 403 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 MBTD1Q05BQ5 628 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 ACAD10Q6JQN1 1059 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 HINFPQ9BQA5 517 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 NFKBIZQ9BYH8 718 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.21■□□□□ 0.03
LDB3-207ENST00000542786 ERAP1Q9NZ08 941 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 TRPC6Q9Y210 931 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 ALG6Q9Y672 507 aa15.21■□□□□ 0.03
LDB3-207ENST00000542786 ZNF236Q9UL36 1845 aa15.21■□□□□ 0.02
LDB3-207ENST00000542786 ZSCAN5CA6NGD5 496 aaPredicted RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 ACKR2O00590 384 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 ATMINO43313 823 aaPredicted RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 RAD51CO43502 376 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 STRNO43815 780 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 GH1P01241 217 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 KRT5P13647 590 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 CLCN3P51790 818 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 ZNF132P52740 706 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 TNNC1P63316 161 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 GRB14Q14449 540 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 MAPK6Q16659 721 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 WDR44Q5JSH3 913 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 ZNF484Q5JVG2 852 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 SPRYD7Q5W111 196 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 EEF1DP3Q658K8 133 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 ZBTB8OSQ8IWT0 167 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 PPTC7Q8NI37 304 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 RPS6KC1Q96S38 1066 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 PTPN18Q99952 460 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 CARD9Q9H257 536 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 MINDY3Q9H8M7 445 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 GBA2Q9HCG7 927 aaPredicted RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 CTTNBP2NLQ9P2B4 639 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 CHORDC1Q9UHD1 332 aaPredicted RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 PCDHB2Q9Y5E7 798 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 B4GALT5O43286 388 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 CYP1A1P04798 512 aaPredicted RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 HOXC6P09630 235 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 IQCF3P0C7M6 154 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 HARSP12081 509 aaKnown RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 ITGA4P13612 1032 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 INSRRP14616 1297 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 AP3M2P53677 418 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 NOP14P78316 857 aaKnown RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 POU5F1Q01860 360 aaKnown RBP15.2■□□□□ 0.02
LDB3-207ENST00000542786 BIRC3Q13489 604 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 EFCAB12Q6NXP0 572 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 ZBTB33Q86T24 672 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 ZNF677Q86XU0 584 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 RHPN2Q8IUC4 686 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 C16orf70Q9BSU1 422 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
LDB3-207ENST00000542786 HEXIM1O94992 359 aaKnown RBP15.19■□□□□ 0.02
LDB3-207ENST00000542786 MARCKSL1P49006 195 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 PEX5P50542 639 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 POU5F1BQ06416 359 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
LDB3-207ENST00000542786 NCOA4Q13772 614 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 TFDP1Q14186 410 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 TERF2Q15554 542 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 AMHR2Q16671 573 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 CPNE8Q86YQ8 564 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 AFG1LQ8WV93 481 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 CASKIN2Q8WXE0 1202 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 CAVIN3Q969G5 261 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 IFT122Q9HBG6 1241 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 UVRAGQ9P2Y5 699 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 ANK1P16157 1881 aa15.19■□□□□ 0.02
LDB3-207ENST00000542786 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 MIF4GDA9UHW6 222 aaKnown RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 CCDC188H7C350 402 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 MEFVO15553 781 aaPredicted RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 ASAP2O43150 1006 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 ADCYAP1R1P41586 468 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 BPIFB4P59827 614 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 FAM187BQ17R55 369 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 GPR142Q7Z601 462 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 UBE2Q2Q8WVN8 375 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 KRT35Q92764 455 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 ZNF653Q96CK0 615 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 ZSWIM1Q9BR11 485 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 NUP85Q9BW27 656 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 AP1M1Q9BXS5 423 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 ZCCHC17Q9NP64 241 aaKnown RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 AVENQ9NQS1 362 aaPredicted RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 TNFSF13BQ9Y275 285 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 NR2E1Q9Y466 385 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 COL1A2P08123 1366 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms