RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 SYN3O14994 580 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 LONP1P36776 959 aaKnown RBP12.47□□□□□ -0.41
VTN-203ENST00000542029 MRE11P49959 708 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 CLCNKBP51801 687 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 SLC12A3P55017 1021 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
VTN-203ENST00000542029 KYAT1Q16773 422 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 TMEM119Q4V9L6 283 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 PPM1LQ5SGD2 360 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
VTN-203ENST00000542029 TAS1R3Q7RTX0 852 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 TMEM161BQ8NDZ6 487 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 PRSS33Q8NF86 280 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 SNX27Q96L92 541 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 PLEKHA5Q9HAU0 1116 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 CNTN3Q9P232 1028 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 MTRRQ9UBK8 725 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 CACNG4Q9UBN1 327 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 FBXL21Q9UKT6 434 aa12.47□□□□□ -0.41
VTN-203ENST00000542029 ABLIM1O14639 778 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 CLDN3O15551 220 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
VTN-203ENST00000542029 C8AP07357 584 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 MAPTP10636 758 aaKnown RBP12.46□□□□□ -0.41
VTN-203ENST00000542029 LAMP2P13473 410 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 FSHRP23945 695 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 OSTNP61366 133 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 TCF15Q12870 199 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 NOLC1Q14978 699 aaKnown RBP eCLIP12.46□□□□□ -0.416e-11■□□□□ 9.5
VTN-203ENST00000542029 CEP120Q8N960 986 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 RASSF8Q8NHQ8 419 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 MYADMQ96S97 322 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 TSPAN18Q96SJ8 248 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 RTP3Q9BQQ7 232 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 WNT16Q9UBV4 365 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 NUB1Q9Y5A7 615 aa12.46□□□□□ -0.41
VTN-203ENST00000542029 H7C4K7 107 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 PODXLO00592 558 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
VTN-203ENST00000542029 N4BP1O75113 896 aaKnown RBP12.45□□□□□ -0.42
VTN-203ENST00000542029 PDGFBP01127 241 aaPredicted RBP12.45□□□□□ -0.42
VTN-203ENST00000542029 CLTAP09496 248 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 MYBP10242 640 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 SRFP11831 508 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 OR1D2P34982 312 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 MCL1Q07820 350 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 RAD51AP2Q09MP3 1159 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 AXDND1Q5T1B0 1012 aaPredicted RBP12.45□□□□□ -0.42
VTN-203ENST00000542029 SLC8B1Q6J4K2 584 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 GET4Q7L5D6 327 aaPredicted RBP12.45□□□□□ -0.42
VTN-203ENST00000542029 APPL2Q8NEU8 664 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 FEZF2Q8TBJ5 459 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 BICD1Q96G01 975 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 PLIN2Q99541 437 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 CXCL16Q9H2A7 254 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 PARVGQ9HBI0 331 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 ANKFY1Q9P2R3 1169 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 CDH7Q9ULB5 785 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 KCNH3Q9ULD8 1083 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 CDY1Q9Y6F8 540 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 ARID2Q68CP9 1835 aa12.45□□□□□ -0.42
VTN-203ENST00000542029 XPOTO43592 962 aaKnown RBP12.44□□□□□ -0.42
VTN-203ENST00000542029 FAM13AO94988 1023 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 KRT18P05783 430 aaKnown RBP12.44□□□□□ -0.42
VTN-203ENST00000542029 HARSP12081 509 aaKnown RBP12.44□□□□□ -0.42
VTN-203ENST00000542029 TKTP29401 623 aaKnown RBP12.44□□□□□ -0.42
VTN-203ENST00000542029 ELF1P32519 619 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 MATR3P43243 847 aaKnown RBP eCLIP12.44□□□□□ -0.42
VTN-203ENST00000542029 NCKAP1LP55160 1127 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 CUL4AQ13619 759 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 CD300LGQ6UXG3 332 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 HAUS6Q7Z4H7 955 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 GPBP1Q86WP2 473 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 SLC44A3Q8N4M1 653 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 ZNF461Q8TAF7 563 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
VTN-203ENST00000542029 ZMAT2Q96NC0 199 aaKnown RBP12.44□□□□□ -0.42
VTN-203ENST00000542029 OXCT2Q9BYC2 517 aaPredicted RBP12.44□□□□□ -0.42
VTN-203ENST00000542029 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 GOLGA2P5Q9HBQ8 144 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 MAFFQ9ULX9 164 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 POLIQ9UNA4 740 aa12.44□□□□□ -0.42
VTN-203ENST00000542029 TRIOO75962 3097 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 HNRNPDLO14979 420 aaKnown RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 CCL16O15467 120 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 ADAM12O43184 909 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 TBCAO75347 108 aaKnown RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 PIGRP01833 764 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 AOC1P19801 751 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 CYP3A5P20815 502 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 RFX1P22670 979 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 PAX3P23760 479 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 MARCKSP29966 332 aaPredicted RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 BRCC3P46736 316 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 LIG4P49917 911 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 ZNF131P52739 623 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms