RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 TMEM105Q8N8V8 129 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 SYT2Q8N9I0 419 aaPredicted RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 FLCNQ8NFG4 579 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 CMASQ8NFW8 434 aaPredicted RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 DDX27Q96GQ7 796 aaKnown RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 REEP2Q9BRK0 252 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 TMEM134Q9H6X4 195 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 KCNK12Q9HB15 430 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 WDR6Q9NNW5 1121 aaKnown RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 HCFC1R1Q9NWW0 138 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 TUBGCP4Q9UGJ1 667 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 FBXW11Q9UKB1 542 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 CDY1Q9Y6F8 540 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 PODXLO00592 558 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 ZMYND10O75800 440 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 C8AP07357 584 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 CFHP08603 1231 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 MAPTP10636 758 aaKnown RBP15.36■□□□□ 0.05
SUDS3-203ENST00000541591 PLS3P13797 630 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 PLCG1P19174 1290 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 PROZP22891 400 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 GUCY2CP25092 1073 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 TNFSF9P41273 254 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 MRE11P49959 708 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 GUCY2FP51841 1108 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 ARPP19P56211 112 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 CEBPZQ03701 1054 aaKnown RBP15.36■□□□□ 0.05
SUDS3-203ENST00000541591 NOLC1Q14978 699 aaKnown RBP eCLIP15.36■□□□□ 0.05
SUDS3-203ENST00000541591 UPP1Q16831 310 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 PPM1LQ5SGD2 360 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 ZBTB41Q5SVQ8 909 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 UBALD2Q8IYN6 164 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 TMEM161BQ8NDZ6 487 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 RASSF8Q8NHQ8 419 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 BICD1Q96G01 975 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 PRKD2Q9BZL6 878 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 MFSD1Q9H3U5 465 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
SUDS3-203ENST00000541591 H0Y858 1186 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 CXCL8P10145 99 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 MCF2P10911 925 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 FGFR3P22607 806 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 MARCKSP29966 332 aaPredicted RBP15.35■□□□□ 0.05
SUDS3-203ENST00000541591 STRN3Q13033 797 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 TDGQ13569 410 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 LIN9Q5TKA1 542 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 CWF19L1Q69YN2 538 aaKnown RBP15.35■□□□□ 0.05
SUDS3-203ENST00000541591 ALKAL1Q6UXT8 129 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.35■□□□□ 0.05
SUDS3-203ENST00000541591 USP49Q70CQ1 688 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 ING5Q8WYH8 240 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 ACAP3Q96P50 834 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 IKZF4Q9H2S9 585 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 BLOC1S4Q9NUP1 217 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 FBXL21Q9UKT6 434 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 CA14Q9ULX7 337 aa15.35■□□□□ 0.05
SUDS3-203ENST00000541591 USP34Q70CQ2 3546 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 K7ENM7 598 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 KRT18P05783 430 aaKnown RBP15.34■□□□□ 0.05
SUDS3-203ENST00000541591 UBA7P41226 1012 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 MCM2P49736 904 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 CREMQ03060 361 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 SLC10A6Q3KNW5 377 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 ARL6IP4Q66PJ3 421 aaKnown RBP15.34■□□□□ 0.05
SUDS3-203ENST00000541591 ELMSAN1Q6PJG2 1045 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 DCLRE1AQ6PJP8 1040 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 APBB1IPQ7Z5R6 666 aaPredicted RBP15.34■□□□□ 0.05
SUDS3-203ENST00000541591 CALML4Q96GE6 196 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 RPP25Q9BUL9 199 aaKnown RBP15.34■□□□□ 0.05
SUDS3-203ENST00000541591 PLEKHA4Q9H4M7 779 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 TOPORSQ9NS56 1045 aaPredicted RBP15.34■□□□□ 0.05
SUDS3-203ENST00000541591 MTRRQ9UBK8 725 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 DUSP12Q9UNI6 340 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 MYO15AQ9UKN7 3530 aa15.34■□□□□ 0.05
SUDS3-203ENST00000541591 DMDP11532 3685 aa15.33■□□□□ 0.05
SUDS3-203ENST00000541591 NUP210Q8TEM1 1887 aaPredicted RBP15.33■□□□□ 0.05
SUDS3-203ENST00000541591 FANCMQ8IYD8 2048 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 TISP43B9A030 160 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 TMEM189-UBE2V1I3L0A0 370 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 PI15O43692 258 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 FAM13AO94988 1023 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 FSHRP23945 695 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 NMT1P30419 496 aaKnown RBP15.33■□□□□ 0.04
SUDS3-203ENST00000541591 CDR1P51861 262 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 NCKAP1LP55160 1127 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 ELAVL2Q12926 359 aaKnown RBP15.33■□□□□ 0.04
SUDS3-203ENST00000541591 XKR4Q5GH76 650 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 VARS2Q5ST30 1063 aaKnown RBP15.33■□□□□ 0.04
SUDS3-203ENST00000541591 AXDND1Q5T1B0 1012 aaPredicted RBP15.33■□□□□ 0.04
SUDS3-203ENST00000541591 HAUS6Q7Z4H7 955 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 SIX5Q8N196 739 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 MYCT1Q8N699 235 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 ITFG1Q8TB96 612 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 SPIRE2Q8WWL2 714 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 RAD54LQ92698 747 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms