RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 RWDD2BP57060 319 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 TMED2Q15363 201 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
VARS2-211ENST00000541562 STYK1Q6J9G0 422 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 KCNV1Q6PIU1 500 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 CYP4X1Q8N118 509 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 SPOCK2Q92563 424 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 GRHL1Q9NZI5 618 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
VARS2-211ENST00000541562 NOCTQ9UK39 431 aaKnown RBP16.04■□□□□ 0.16
VARS2-211ENST00000541562 MTUS1Q9ULD2 1270 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 PTGER2P43116 358 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 GAD2Q05329 585 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 WDR44Q5JSH3 913 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 NUGGCQ68CJ6 796 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 NCAPG2Q86XI2 1143 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 C4orf33Q8N1A6 199 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 HELQQ8TDG4 1101 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 NLRP4Q96MN2 994 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 SLITRK6Q9H5Y7 841 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
VARS2-211ENST00000541562 ZNF148Q9UQR1 794 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 TCP11X1B4DZS4 312 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 PHF2O75151 1096 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 RPS6KA5O75582 802 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 CST3P01034 146 aaPredicted RBP16.03■□□□□ 0.16
VARS2-211ENST00000541562 EDN1P05305 212 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 DSG3P32926 999 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 ACTR2P61160 394 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 SKOR1P84550 965 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 PPP2R5AQ15172 486 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 HIBCHQ6NVY1 386 aaPredicted RBP16.03■□□□□ 0.16
VARS2-211ENST00000541562 EMC1Q8N766 993 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 DEPTORQ8TB45 409 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 RIT2Q99578 217 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 CARD9Q9H257 536 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 ADAM22Q9P0K1 906 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 FAM107AO95990 144 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 CDH8P55286 799 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
VARS2-211ENST00000541562 KIF22Q14807 665 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 FHDC1Q9C0D6 1143 aaPredicted RBP16.03■□□□□ 0.16
VARS2-211ENST00000541562 EPB41L4BQ9H329 900 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 PICK1Q9NRD5 415 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 SEL1LQ9UBV2 794 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 GTF3C4Q9UKN8 822 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 MRPL42Q9Y6G3 142 aaKnown RBP16.03■□□□□ 0.16
VARS2-211ENST00000541562 K7ERI5 159 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 VWA5AO00534 786 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 FASTKD3Q14CZ7 662 aaKnown RBP16.03■□□□□ 0.16
VARS2-211ENST00000541562 RHOT2Q8IXI1 618 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 IFT74Q96LB3 600 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 MSTO1Q9BUK6 570 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 XPNPEP1Q9NQW7 623 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 ZDHHC18Q9NUE0 388 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
VARS2-211ENST00000541562 RGS20O76081 388 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 ZNF365Q70YC5 407 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 RASGEF1CQ8N431 466 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 ASAP3Q8TDY4 903 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 ARHGEF2Q92974 986 aaKnown RBP16.02■□□□□ 0.16
VARS2-211ENST00000541562 ZNF541Q9H0D2 1346 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 F8VP50 259 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 RXRBP28702 533 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 POU5F1Q01860 360 aaKnown RBP16.02■□□□□ 0.16
VARS2-211ENST00000541562 LY6KQ17RY6 165 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 GKAP1Q5VSY0 366 aaPredicted RBP16.02■□□□□ 0.16
VARS2-211ENST00000541562 TDRD10Q5VZ19 366 aaKnown RBP16.02■□□□□ 0.16
VARS2-211ENST00000541562 XPO6Q96QU8 1125 aaKnown RBP16.02■□□□□ 0.16
VARS2-211ENST00000541562 MKNK1Q9BUB5 465 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 PABPC3Q9H361 631 aaKnown RBP16.02■□□□□ 0.16
VARS2-211ENST00000541562 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 ABCF3Q9NUQ8 709 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.16
VARS2-211ENST00000541562 SLC12A6Q9UHW9 1150 aa16.02■□□□□ 0.16
VARS2-211ENST00000541562 TLR3O15455 904 aaKnown RBP16.02■□□□□ 0.15
VARS2-211ENST00000541562 PTGIRP43119 386 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 GCLCP48506 637 aaPredicted RBP16.02■□□□□ 0.15
VARS2-211ENST00000541562 PEX5P50542 639 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 STRN3Q13033 797 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 TMEM132BQ14DG7 1078 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.15
VARS2-211ENST00000541562 DCUN1D2Q6PH85 259 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 ARFGAP2Q8N6H7 521 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 C1orf131Q8NDD1 294 aaKnown RBP16.02■□□□□ 0.15
VARS2-211ENST00000541562 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.15
VARS2-211ENST00000541562 ANAPC5Q9UJX4 755 aa16.02■□□□□ 0.15
VARS2-211ENST00000541562 AGO2Q9UKV8 859 aaKnown RBP16.02■□□□□ 0.15
VARS2-211ENST00000541562 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 GTPBP10A4D1E9 387 aaKnown RBP16.01■□□□□ 0.15
VARS2-211ENST00000541562 GNA15P30679 374 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 CYP24A1Q07973 514 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 CDO1Q16878 200 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 FAM71AQ8IYT1 594 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 CALR3Q96L12 384 aaKnown RBP16.01■□□□□ 0.15
VARS2-211ENST00000541562 MCEEQ96PE7 176 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 MOV10L1Q9BXT6 1211 aaKnown RBP16.01■□□□□ 0.15
VARS2-211ENST00000541562 MTMR12Q9C0I1 747 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 VPS37BQ9H9H4 285 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms