RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 PLS3P13797 630 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 YARSP54577 528 aaKnown RBP15.86■□□□□ 0.13
MSRB3-209ENST00000540804 CREMQ03060 361 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 SPAG1Q07617 926 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 LARP1BQ659C4 914 aaKnown RBP15.86■□□□□ 0.13
MSRB3-209ENST00000540804 ELMSAN1Q6PJG2 1045 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 MPZL3Q6UWV2 235 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 CYP26C1Q6V0L0 522 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.86■□□□□ 0.13
MSRB3-209ENST00000540804 SIX5Q8N196 739 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 SLC44A3Q8N4M1 653 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 DDX27Q96GQ7 796 aaKnown RBP15.86■□□□□ 0.13
MSRB3-209ENST00000540804 RPP25Q9BUL9 199 aaKnown RBP15.86■□□□□ 0.13
MSRB3-209ENST00000540804 RHOBTB2Q9BYZ6 727 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 MFSD1Q9H3U5 465 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 UPF2Q9HAU5 1272 aaKnown RBP15.86■□□□□ 0.13
MSRB3-209ENST00000540804 HCFC1R1Q9NWW0 138 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 EPS15L1Q9UBC2 864 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 POLIQ9UNA4 740 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 CDY1Q9Y6F8 540 aa15.86■□□□□ 0.13
MSRB3-209ENST00000540804 TMEM189-UBE2V1I3L0A0 370 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 PODXLO00592 558 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 ELAVL2Q12926 359 aaKnown RBP15.85■□□□□ 0.13
MSRB3-209ENST00000540804 PPM1LQ5SGD2 360 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 ASTLQ6HA08 431 aaPredicted RBP15.85■□□□□ 0.13
MSRB3-209ENST00000540804 ITFG1Q8TB96 612 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 SLC7A14Q8TBB6 771 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 STAMQ92783 540 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 ACAP3Q96P50 834 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 NTPCRQ9BSD7 190 aaKnown RBP15.85■□□□□ 0.13
MSRB3-209ENST00000540804 MTRRQ9UBK8 725 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 FBXL21Q9UKT6 434 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
MSRB3-209ENST00000540804 DMDP11532 3685 aa15.85■□□□□ 0.13
MSRB3-209ENST00000540804 KRBA1A5PL33 1030 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 GALR2O43603 387 aaPredicted RBP15.84■□□□□ 0.13
MSRB3-209ENST00000540804 C1RP00736 705 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 LAMP2P13473 410 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 FSHRP23945 695 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 STRN3Q13033 797 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 RAB33AQ14088 237 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 MCM6Q14566 821 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 SF3A1Q15459 793 aaKnown RBP15.84■□□□□ 0.13
MSRB3-209ENST00000540804 SLC10A6Q3KNW5 377 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 AXDND1Q5T1B0 1012 aaPredicted RBP15.84■□□□□ 0.13
MSRB3-209ENST00000540804 LIN9Q5TKA1 542 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 ARL6IP4Q66PJ3 421 aaKnown RBP15.84■□□□□ 0.13
MSRB3-209ENST00000540804 APBB1IPQ7Z5R6 666 aaPredicted RBP15.84■□□□□ 0.13
MSRB3-209ENST00000540804 ATOH1Q92858 354 aaPredicted RBP15.84■□□□□ 0.13
MSRB3-209ENST00000540804 UROC1Q96N76 676 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 C17orf75Q9HAS0 396 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 TOPORSQ9NS56 1045 aaPredicted RBP15.84■□□□□ 0.13
MSRB3-209ENST00000540804 BLOC1S4Q9NUP1 217 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 CNTN3Q9P232 1028 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 IGSF9Q9P2J2 1179 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 TUBGCP4Q9UGJ1 667 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 CA14Q9ULX7 337 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 NUMBLQ9Y6R0 609 aa15.84■□□□□ 0.13
MSRB3-209ENST00000540804 VPS37CA5D8V6 355 aaPredicted RBP15.83■□□□□ 0.12
MSRB3-209ENST00000540804 TOM1L1O75674 476 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 CXCL8P10145 99 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 KCNE1P15382 129 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 TNFSF9P41273 254 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 MCM2P49736 904 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 ARPP19P56211 112 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 NOLC1Q14978 699 aaKnown RBP eCLIP15.83■□□□□ 0.12
MSRB3-209ENST00000540804 KARSQ15046 597 aaKnown RBP15.83■□□□□ 0.12
MSRB3-209ENST00000540804 SPECC1Q5M775 1068 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 VARS2Q5ST30 1063 aaKnown RBP15.83■□□□□ 0.12
MSRB3-209ENST00000540804 ZBTB41Q5SVQ8 909 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 FAM173BQ6P4H8 233 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 POTEHQ6S545 545 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 PARM1Q6UWI2 310 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 GPBP1Q86WP2 473 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 GPR152Q8TDT2 470 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 FGF14Q92915 247 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 PRRX2Q99811 253 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 REEP2Q9BRK0 252 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 TIPINQ9BVW5 301 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 DNMT3BQ9UBC3 853 aaKnown RBP15.83■□□□□ 0.12
MSRB3-209ENST00000540804 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.83■□□□□ 0.12
MSRB3-209ENST00000540804 MYO15AQ9UKN7 3530 aa15.83■□□□□ 0.12
MSRB3-209ENST00000540804 USP34Q70CQ2 3546 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 PLCG1P19174 1290 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.12
MSRB3-209ENST00000540804 GUCY2FP51841 1108 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 SMTNP53814 917 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 NCKAP1LP55160 1127 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 ROR1Q01973 937 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 HTR4Q13639 388 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 USP49Q70CQ1 688 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 ING5Q8WYH8 240 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.82■□□□□ 0.12
MSRB3-209ENST00000540804 BACE2Q9Y5Z0 518 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 CLIC4Q9Y696 253 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 VWA8A3KMH1 1905 aa15.82■□□□□ 0.12
MSRB3-209ENST00000540804 WDR27A2RRH5 827 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms