RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 TRAIPQ9BWF2 469 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 ECT2Q9H8V3 914 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 VEZTQ9HBM0 779 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
NPC1-202ENST00000540608 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 ANAPC7Q9UJX3 599 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 ARL2BPQ9Y2Y0 163 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 GAS8O95995 478 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 SCP2P22307 547 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 GTF2H1P32780 548 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 SLC1A1P43005 524 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
NPC1-202ENST00000540608 FBXL13Q8NEE6 735 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 FAM81BQ96LP2 452 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 PRKAG3Q9UGI9 489 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 ANAPC5Q9UJX4 755 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 THAP12O43422 761 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 SORBS3O60504 671 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 RAD17O75943 681 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 ALADP13716 330 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 BRAFP15056 766 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 ATF2P15336 505 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 IBSPP21815 317 aaPredicted RBP13.11□□□□□ -0.31
NPC1-202ENST00000540608 COPS2P61201 443 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
NPC1-202ENST00000540608 MPP2Q14168 576 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
NPC1-202ENST00000540608 SPATA21Q7Z572 469 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 ANKRD42Q8N9B4 389 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 TMC2Q8TDI7 906 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 TAS1R2Q8TE23 839 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 ATG4AQ8WYN0 398 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 TBC1D31Q96DN5 1066 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 MFSD14AQ96MC6 490 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 GPRC5CQ9NQ84 441 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 AVENQ9NQS1 362 aaPredicted RBP13.11□□□□□ -0.31
NPC1-202ENST00000540608 COL20A1Q9P218 1284 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 CTNNAL1Q9UBT7 734 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 LGALS13Q9UHV8 139 aa13.11□□□□□ -0.31
NPC1-202ENST00000540608 UNGP13051 313 aaPredicted RBP13.1□□□□□ -0.31
NPC1-202ENST00000540608 CNGA1P29973 690 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 ADCY8P40145 1251 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 KCNJ2P63252 427 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 TKFCQ3LXA3 575 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 DHX38Q92620 1227 aaKnown RBP13.1□□□□□ -0.31
NPC1-202ENST00000540608 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 SH2D3AQ9BRG2 576 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 TMEM39BQ9GZU3 492 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 EBF2Q9HAK2 575 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 GGT7Q9UJ14 662 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
NPC1-202ENST00000540608 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPC1-202ENST00000540608 NEU2Q9Y3R4 380 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 UBIAD1Q9Y5Z9 338 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 CENPCQ03188 943 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 SPP2Q13103 211 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 DLGAP5Q15398 846 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 TRIP13Q15645 432 aaPredicted RBP13.1□□□□□ -0.31
NPC1-202ENST00000540608 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
NPC1-202ENST00000540608 C4orf19Q8IY42 314 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 TMEM161BQ8NDZ6 487 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 MAGEB18Q96M61 343 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 HERPUD2Q9BSE4 406 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
NPC1-202ENST00000540608 ZNFX1Q9P2E3 1918 aaKnown RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 MYBL1P10243 752 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 PTP4A2Q12974 167 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 FAM102BQ5T8I3 360 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ARHGEF18Q6ZSZ5 1173 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ENOSF1Q7L5Y1 443 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 RELL1Q8IUW5 271 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 BBOF1Q8ND07 529 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 FBXL18Q96ME1 805 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 NAALADL1Q9UQQ1 740 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 ADGRA3Q8IWK6 1321 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 TMEM150BA6NC51 233 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 GH1P01241 217 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 KRT5P13647 590 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 STX2P32856 288 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 GCNT1Q02742 428 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 SV2AQ7L0J3 742 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms