RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 DDIT3P35638 169 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 GRIN1Q05586 938 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 NAB2Q15742 525 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 PSMD5Q16401 504 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 UPP1Q16831 310 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 TMEM119Q4V9L6 283 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 SEZ6Q53EL9 994 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 SPECC1Q5M775 1068 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 RTP2Q5QGT7 225 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 IER5LQ5T953 404 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 PDXDC1Q6P996 788 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 USP34Q70CQ2 3546 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 HAUS6Q7Z4H7 955 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 TMEM161BQ8NDZ6 487 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 LNX1Q8TBB1 728 aaPredicted RBP9.86□□□□□ -0.83
LMO3-222ENST00000540445 HDAC7Q8WUI4 952 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 STAMQ92783 540 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
LMO3-222ENST00000540445 UROC1Q96N76 676 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 PPP1R10Q96QC0 940 aaKnown RBP9.86□□□□□ -0.83
LMO3-222ENST00000540445 CLSTN3Q9BQT9 956 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 RHOBTB2Q9BYZ6 727 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 GOLGA2P5Q9HBQ8 144 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 CCDC39Q9UFE4 941 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 ODF2LQ9ULJ1 636 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 SORCS3Q9UPU3 1222 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 CACNA1HO95180 2353 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 VPS13AQ96RL7 3174 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 TOM1L1O75674 476 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 MAPTP10636 758 aaKnown RBP9.85□□□□□ -0.83
LMO3-222ENST00000540445 PROZP22891 400 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 OR1D2P34982 312 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 BRCC3P46736 316 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 LIG4P49917 911 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 VCPP55072 806 aaKnown RBP9.85□□□□□ -0.83
LMO3-222ENST00000540445 NOLC1Q14978 699 aaKnown RBP eCLIP9.85□□□□□ -0.83
LMO3-222ENST00000540445 PPM1LQ5SGD2 360 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 FAM173BQ6P4H8 233 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 LILRA6Q6PI73 481 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 ALKAL1Q6UXT8 129 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 CYP26C1Q6V0L0 522 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 UBALD2Q8IYN6 164 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 KRI1Q8N9T8 703 aaKnown RBP9.85□□□□□ -0.83
LMO3-222ENST00000540445 PIK3R5Q8WYR1 880 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 RAD54LQ92698 747 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 INTS4Q96HW7 963 aaKnown RBP9.85□□□□□ -0.83
LMO3-222ENST00000540445 EPSTI1Q96J88 318 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 REEP2Q9BRK0 252 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 PRKD2Q9BZL6 878 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 CCSER1Q9C0I3 900 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 SMOC2Q9H3U7 446 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 PARVGQ9HBI0 331 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 BLOC1S4Q9NUP1 217 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 POLIQ9UNA4 740 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 NUB1Q9Y5A7 615 aa9.85□□□□□ -0.83
LMO3-222ENST00000540445 TMEM189-UBE2V1I3L0A0 370 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 I3L4J1 428 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 K7ENM7 598 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 PODXLO00592 558 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 TRAK2O60296 914 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 TBCAO75347 108 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 ZMYND10O75800 440 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 PDGFBP01127 241 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 HSP90AA1P07900 732 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 IGFBP6P24592 240 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 AVPR2P30518 371 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 RPL9P32969 192 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 TXLNAP40222 546 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 SOX4Q06945 474 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 TCF15Q12870 199 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 SLC10A6Q3KNW5 377 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 XKR4Q5GH76 650 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 LIN9Q5TKA1 542 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 RRAGBQ5VZM2 374 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 ZPBP2Q6X784 338 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 ALYREFQ86V81 257 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 LARP4BQ92615 738 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 C18orf25Q96B23 403 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 ZNF707Q96C28 371 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 FAM212AQ96EL1 285 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 ZMAT2Q96NC0 199 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 CLIC6Q96NY7 704 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 ZSCAN16Q9H4T2 348 aaPredicted RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 WDR6Q9NNW5 1121 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 ZDHHC7Q9NXF8 308 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 TBX20Q9UMR3 447 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 SRPRBQ9Y5M8 271 aaKnown RBP9.84□□□□□ -0.83
LMO3-222ENST00000540445 CDY1Q9Y6F8 540 aa9.84□□□□□ -0.83
LMO3-222ENST00000540445 ABLIM1O14639 778 aa9.83□□□□□ -0.84
LMO3-222ENST00000540445 HNRNPDLO14979 420 aaKnown RBP9.83□□□□□ -0.84
LMO3-222ENST00000540445 ADAM12O43184 909 aa9.83□□□□□ -0.84
LMO3-222ENST00000540445 STX6O43752 255 aa9.83□□□□□ -0.84
LMO3-222ENST00000540445 N4BP1O75113 896 aaKnown RBP9.83□□□□□ -0.84
LMO3-222ENST00000540445 C8AP07357 584 aa9.83□□□□□ -0.84
LMO3-222ENST00000540445 KCNE1P15382 129 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms