RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 CPSF3Q9UKF6 684 aaKnown RBP9.96□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRPV2Q9Y5S1 764 aa9.96□□□□□ -0.82
RTN4IP1-204ENST00000539449 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.96□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRANK1O15050 2925 aa9.96□□□□□ -0.82
RTN4IP1-204ENST00000539449 PDCD11Q14690 1871 aaKnown RBP9.96□□□□□ -0.82
RTN4IP1-204ENST00000539449 USP34Q70CQ2 3546 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 A0A0U1RQG5 324 aaPredicted RBP9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 A0A1B0GUA9 196 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 TTC26A0AVF1 554 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 ARVCFO00192 962 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 NPTXRO95502 500 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 PON1P27169 355 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 THPOP40225 353 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 GCLMP48507 274 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 CCZ1BP86790 482 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 CCZ1P86791 482 aaPredicted RBP9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 PPP2R3AQ06190 1150 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 PTK7Q13308 1070 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 NOLC1Q14978 699 aaKnown RBP eCLIP9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 PSMD6Q15008 389 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 ENOX2Q16206 610 aaKnown RBP9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 UBXN11Q5T124 520 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 GJB7Q6PEY0 223 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRAF7Q6Q0C0 670 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 RPAINQ86UA6 219 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 GPIHBP1Q8IV16 184 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 LMO3Q8TAP4 145 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 SEMA4DQ92854 862 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 EIF2AQ9BY44 585 aaKnown RBP9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 TMEM117Q9H0C3 514 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 GANQ9H2C0 597 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 NKX2-4Q9H2Z4 354 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 AGO3Q9H9G7 860 aaKnown RBP9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 AGPAT5Q9NUQ2 364 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 MSRAQ9UJ68 235 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 PYCARDQ9ULZ3 195 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 RALGAPA2Q2PPJ7 1873 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 SCN5AQ14524 2016 aa9.95□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZNF318Q5VUA4 2279 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 KIAA0391O15091 583 aaKnown RBP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 MFAP3LO75121 409 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 ERLIN2O94905 339 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 LDHAP00338 332 aaKnown RBP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 DLATP10515 647 aaKnown RBP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 MCF2P10911 925 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 CDC42EP1Q00587 391 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 RAB30Q15771 203 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 EPC2Q52LR7 807 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 FAM26DQ5JW98 314 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZNF618Q5T7W0 954 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 RASIP1Q5U651 963 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 E4F1Q66K89 784 aaPredicted RBP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 PPFIBP1Q86W92 1011 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 TMEM139Q8IV31 216 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 BRSK2Q8IWQ3 736 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 LRRC8AQ8IWT6 810 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 OR5B17Q8NGF7 314 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 PRIMPOLQ96LW4 560 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 KIAA1586Q9HCI6 787 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 RBAKQ9NYW8 714 aaPredicted RBP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 COG5Q9UP83 839 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 CFAP54Q96N23 3096 aa9.94□□□□□ -0.82
RTN4IP1-204ENST00000539449 LACTBL1A8MY62 500 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 GOLGA6L6A8MZA4 724 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 AKR1B15C9JRZ8 316 aaPredicted RBP9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 CD4P01730 458 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 C4BPAP04003 597 aaKnown RBP9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 STAG3L1P0CL83 205 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 CXCL8P10145 99 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 KRT9P35527 623 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 CLDN10P78369 228 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 MYL7Q01449 175 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 LPIN1Q14693 890 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 MBTPS1Q14703 1052 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 EXOC3L4Q17RC7 722 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 SLC10A6Q3KNW5 377 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 FBXO47Q5MNV8 452 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 TMEM240Q5SV17 173 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 GBP6Q6ZN66 633 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 C15orf39Q6ZRI6 1047 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 SV2AQ7L0J3 742 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 C16orf59Q7L2K0 433 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 ARHGEF19Q8IW93 802 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 FAM126BQ8IXS8 530 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 EFCAB13Q8IY85 973 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 EHBP1Q8NDI1 1231 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 TAS1R2Q8TE23 839 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 BAP1Q92560 729 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 CGRRF1Q99675 332 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 INTS2Q9H0H0 1204 aaKnown RBP9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 TMX1Q9H3N1 280 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 SLC28A3Q9HAS3 691 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms