RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 APBB2Q92870 758 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 ANKRD36BP1Q96IX9 119 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 SNX27Q96L92 541 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 LSM14BQ9BX40 385 aaKnown RBP11.52□□□□□ -0.57
LEMD3-202ENST00000539442 TTYH3Q9C0H2 523 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 TMX1Q9H3N1 280 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 NXF3Q9H4D5 531 aaKnown RBP11.52□□□□□ -0.57
LEMD3-202ENST00000539442 FAM105AQ9NUU6 356 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 SNTG2Q9NY99 539 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 FBXL5Q9UKA1 691 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 DERAQ9Y315 318 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 C2CD2Q9Y426 696 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 IPPQ9Y573 584 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 A0A0U1RQF3 1178 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 LACTBL1A8MY62 500 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 AKR1B15C9JRZ8 316 aaPredicted RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 NBNO60934 754 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 ZNF623O75123 536 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 ZC3H11AO75152 810 aaKnown RBP eCLIP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 RECQL4O94761 1208 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 TNNC2P02585 160 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CXCL10P02778 98 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 C4BPAP04003 597 aaKnown RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 TMEM191BP0C7N4 346 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 PYGBP11216 843 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CHRM1P11229 460 aaPredicted RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 PON1P27169 355 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 RFC2P35250 354 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 KLK7P49862 253 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 XKR4Q5GH76 650 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 TRIM65Q6PJ69 517 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CCDC186Q7Z3E2 898 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 MRPL10Q7Z7H8 261 aaKnown RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 SMG8Q8ND04 991 aaKnown RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 EHBP1Q8NDI1 1231 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 FBXL13Q8NEE6 735 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 ZNF397Q8NF99 534 aaPredicted RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CACTINQ8WUQ7 758 aaKnown RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 SEPT8Q92599 483 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 PGBD4Q96DM1 585 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 POP1Q99575 1024 aaKnown RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CRACR2AQ9BSW2 395 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 OSBPL7Q9BZF2 842 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 INTS2Q9H0H0 1204 aaKnown RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 RGS18Q9NS28 235 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 C1orf112Q9NSG2 853 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 FAM207AQ9NSI2 230 aaPredicted RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 TMEM39AQ9NV64 488 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CEP72Q9P209 647 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CNTN3Q9P232 1028 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 CAPN11Q9UMQ6 739 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 PCDHB2Q9Y5E7 798 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.51□□□□□ -0.57
LEMD3-202ENST00000539442 PTPRJQ12913 1337 aa11.51□□□□□ -0.57
LEMD3-202ENST00000539442 MEFVO15553 781 aaPredicted RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 XPOTO43592 962 aaKnown RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 MGEA5O60502 916 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 MFAP3LO75121 409 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 ITGA4P13612 1032 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 SLC9A1P19634 815 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 CASP14P31944 242 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 ZBED6P86452 979 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 TFAMQ00059 246 aaKnown RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 BIRC3Q13489 604 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 GPNMBQ14956 572 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 TMEM132DQ14C87 1099 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 HS1BP3Q53T59 392 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 PLEKHG4Q58EX7 1191 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 KLHDC7AQ5VTJ3 777 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 LMBRD2Q68DH5 695 aaPredicted RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 JADE1Q6IE81 842 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 DPY19L2P1Q6NXN4 242 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 ALKAL1Q6UXT8 129 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 EFCAB13Q8IY85 973 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 OR5B17Q8NGF7 314 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 LMO3Q8TAP4 145 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 FAM81BQ96LP2 452 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 ADAM2Q99965 735 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 PPP1R12CQ9BZL4 782 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 NUCKS1Q9H1E3 243 aaKnown RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 WNT8AQ9H1J5 351 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 GANQ9H2C0 597 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 SIX2Q9NPC8 291 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 UBN1Q9NPG3 1134 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 RAB20Q9NX57 234 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 APEX2Q9UBZ4 518 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 PARP2Q9UGN5 583 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 GIT1Q9Y2X7 761 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 LUC7L2Q9Y383 392 aaKnown RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 BOLA1Q9Y3E2 137 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 HES2Q9Y543 173 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 UMODL1Q5DID0 1318 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 TANC1Q9C0D5 1861 aa11.5□□□□□ -0.57
LEMD3-202ENST00000539442 KIAA0100Q14667 2235 aaKnown RBP11.5□□□□□ -0.57
LEMD3-202ENST00000539442 C9IYK1 514 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms