RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 GASTP01350 101 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 RPLP2P05387 115 aaKnown RBP3.9□□□□□ -1.79
SNHG1-210ENST00000539303 SMARCA1P28370 1054 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 TRAPPC10P48553 1259 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 GPSM2P81274 684 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 RIN1Q13671 783 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 NFYCQ13952 458 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 CSRP2Q16527 193 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 KHDC1LQ5JSQ8 128 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 SESTD1Q86VW0 696 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 FAM186BQ8IYM0 893 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 KRT78Q8N1N4 520 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 PCSK9Q8NBP7 692 aaKnown RBP3.9□□□□□ -1.79
SNHG1-210ENST00000539303 TNPO1Q92973 898 aaKnown RBP3.9□□□□□ -1.79
SNHG1-210ENST00000539303 CYFIP2Q96F07 1278 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 IL17RAQ96F46 866 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 APIPQ96GX9 242 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 TNIP3Q96KP6 325 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 SGCZQ96LD1 299 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 RIPOR3Q96MK2 946 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 MYD88Q99836 296 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 MRI1Q9BV20 369 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 C11orf54Q9H0W9 315 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-210ENST00000539303 ADAM7Q9H2U9 754 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 NLRC4Q9NPP4 1024 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-210ENST00000539303 PUF60Q9UHX1 559 aaKnown RBP3.9□□□□□ -1.79
SNHG1-210ENST00000539303 TPCN1Q9ULQ1 816 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 DMTF1Q9Y222 760 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 SNX13Q9Y5W8 968 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 SLC4A7Q9Y6M7 1214 aa3.9□□□□□ -1.79
SNHG1-210ENST00000539303 RASA4BC9J798 803 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 KIAA0391O15091 583 aaKnown RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 RASA4O43374 803 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 NUAK1O60285 661 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 NOBOXO60393 691 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 EIF3JO75822 258 aaKnown RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 IL2RBP14784 551 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 BRAFP15056 766 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 ZKSCAN1P17029 563 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 FLT3LGP49771 235 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 GZMKP49863 264 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 CASP5P51878 434 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 SUMO3P55854 103 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 SOX8P57073 446 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 RAP2BP61225 183 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 FMO1Q01740 532 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 SP140Q13342 867 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 MRPL49Q13405 166 aaKnown RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 MORC3Q14149 939 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 GAGE13Q4V321 117 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 C3orf38Q5JPI3 329 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 FAM83BQ5T0W9 1011 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 NT5DC1Q5TFE4 455 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 KLHDC7AQ5VTJ3 777 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 ERAP2Q6P179 960 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 ZNF529Q6P280 563 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 C1orf228Q6PIY5 440 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 SMC5Q8IY18 1101 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 RNF169Q8NCN4 708 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 SHCBP1Q8NEM2 672 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 CASKIN2Q8WXE0 1202 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 MAML1Q92585 1016 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 RABGGTAQ92696 567 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 LPPQ93052 612 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 PHKBQ93100 1093 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 KIAA1191Q96A73 305 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 MTFMTQ96DP5 389 aaKnown RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 NEIL1Q96FI4 390 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 TMEM176AQ96HP8 235 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 CCDC138Q96M89 665 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 FMNL2Q96PY5 1086 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 LRRC37BQ96QE4 947 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 PPP1R16BQ96T49 567 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 LSM14BQ9BX40 385 aaKnown RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 PCGF6Q9BYE7 350 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 LRRC27Q9C0I9 530 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 NUP62CLQ9H1M0 184 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 C12orf65Q9H3J6 166 aaKnown RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 PLCB1Q9NQ66 1216 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 GJB4Q9NTQ9 266 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 MRPS18AQ9NVS2 196 aaKnown RBP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 FBXO34Q9NWN3 711 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 RNF114Q9Y508 228 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNHG1-210ENST00000539303 DUSP10Q9Y6W6 482 aa3.89□□□□□ -1.79
SNHG1-210ENST00000539303 A0A1W2PRX2 142 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 POM121BA6NF01 834 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 NRP1O14786 923 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 TSHRP16473 764 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 TNFSF4P23510 183 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 SLC6A2P23975 617 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 RAP1GAPP47736 663 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 PIK3CGP48736 1102 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 PSMC1P62191 440 aaKnown RBP3.88□□□□□ -1.79
SNHG1-210ENST00000539303 ZNF543Q08ER8 600 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 STK3Q13188 491 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 DUSP8Q13202 625 aa3.88□□□□□ -1.79
SNHG1-210ENST00000539303 IFIT5Q13325 482 aaKnown RBP3.88□□□□□ -1.79
SNHG1-210ENST00000539303 VPS72Q15906 364 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms