RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 KCND1Q9NSA2 647 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 SAMSN1Q9NSI8 373 aaKnown RBP11.07□□□□□ -0.64
CLPB-210ENST00000539148 CNTN3Q9P232 1028 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 LIMA1Q9UHB6 759 aaKnown RBP11.07□□□□□ -0.64
CLPB-210ENST00000539148 FNDC1Q4ZHG4 1894 aaPredicted RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 GTPBP10A4D1E9 387 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 LRRC10BA6NIK2 292 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 INPPL1O15357 1258 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 FAM189A1O60320 539 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 AFPP02771 609 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 EDN1P05305 212 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 ADRB2P07550 413 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 CXCL8P10145 99 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 P4HA1P13674 534 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 ZNF18P17022 549 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 TRIM21P19474 475 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 CYP3A5P20815 502 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 PNPLA4P41247 253 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 CASP4P49662 377 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 TRPC3Q13507 836 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 GPNMBQ14956 572 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 NCAPHQ15003 741 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 ENOX2Q16206 610 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 NOMO2Q5JPE7 1267 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 KRT39Q6A163 491 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 SMYD5Q6GMV2 418 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 OTOP2Q7RTS6 562 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 CCDC186Q7Z3E2 898 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 ZNF598Q86UK7 904 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 TRIM59Q8IWR1 403 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 SMG8Q8ND04 991 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 KIAA1524Q8TCG1 905 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 TOP1MTQ969P6 601 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 UBE2OQ9C0C9 1292 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 TMEM8AQ9HCN3 771 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 ITGA11Q9UKX5 1188 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 USP20Q9Y2K6 914 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 DAAM1Q9Y4D1 1078 aa11.06□□□□□ -0.64
CLPB-210ENST00000539148 RANBP2P49792 3224 aaKnown RBP11.06□□□□□ -0.64
CLPB-210ENST00000539148 ARL5CA6NH57 179 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 LACTBL1A8MY62 500 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 PMM2O15305 246 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 MGEA5O60502 916 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 TPM1P09493 284 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 ACRP10323 421 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 IBSPP21815 317 aaPredicted RBP11.05□□□□□ -0.64
CLPB-210ENST00000539148 AKAP5P24588 427 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 ITGB8P26012 769 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 RPL9P32969 192 aaKnown RBP11.05□□□□□ -0.64
CLPB-210ENST00000539148 MLH1P40692 756 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 TNFSF9P41273 254 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 MXI1P50539 228 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 UBASH3AP57075 661 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 MCCD1P59942 119 aaPredicted RBP11.05□□□□□ -0.64
CLPB-210ENST00000539148 WDR5P61964 334 aaKnown RBP11.05□□□□□ -0.64
CLPB-210ENST00000539148 CLDN10P78369 228 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 TFAMQ00059 246 aaKnown RBP11.05□□□□□ -0.64
CLPB-210ENST00000539148 FANCCQ00597 558 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 KCNH2Q12809 1159 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 MYO1EQ12965 1108 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 BIRC3Q13489 604 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 SLC10A6Q3KNW5 377 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 VWA3BQ502W6 1294 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 XKR4Q5GH76 650 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 TMEM240Q5SV17 173 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 CRELD2Q6UXH1 353 aaPredicted RBP11.05□□□□□ -0.64
CLPB-210ENST00000539148 RTN4RL1Q86UN2 441 aaPredicted RBP11.05□□□□□ -0.64
CLPB-210ENST00000539148 FMNL3Q8IVF7 1028 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 LRRC43Q8N309 656 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 TAF4BQ92750 862 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 EEF2KMTQ96G04 330 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 FAXDC2Q96IV6 333 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 ZNF560Q96MR9 790 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 YME1L1Q96TA2 773 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 HAPLN2Q9GZV7 340 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 IKZF4Q9H2S9 585 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 NDST4Q9H3R1 872 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 INTS13Q9NVM9 706 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 RWDD3Q9Y3V2 267 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 HES2Q9Y543 173 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 INSL6Q9Y581 213 aa11.05□□□□□ -0.64
CLPB-210ENST00000539148 SMIM28A0A1B0GU29 152 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 TRAPPC3O43617 180 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 ZC3H11AO75152 810 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLPB-210ENST00000539148 CLSTN1O94985 981 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 UPP2O95045 317 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 ATICP31939 592 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 BMP8BP34820 402 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 MAGEA10P43363 369 aaPredicted RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 COPB1P53618 953 aaKnown RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 RBP5P82980 135 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 MYL7Q01449 175 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 TUSC3Q13454 348 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms