RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 C1orf122Q6ZSJ8 110 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 ATG16L2Q8NAA4 619 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 ATP11CQ8NB49 1132 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 SHKBP1Q8TBC3 707 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 SUCLG2Q96I99 432 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 ZSCAN31Q96LW9 406 aaPredicted RBP10.38□□□□□ -0.75
CD9-207ENST00000538418 FDXACB1Q9BRP7 624 aaPredicted RBP10.38□□□□□ -0.75
CD9-207ENST00000538418 CARS2Q9HA77 564 aaKnown RBP10.38□□□□□ -0.75
CD9-207ENST00000538418 RXFP1Q9HBX9 757 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 SLC39A2Q9NP94 309 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 RASSF1Q9NS23 344 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 CRYL1Q9Y2S2 319 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 DAPK1P53355 1430 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 FGD6Q6ZV73 1430 aa10.38□□□□□ -0.75
CD9-207ENST00000538418 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
CD9-207ENST00000538418 EIF3FO00303 357 aaPredicted RBP10.37□□□□□ -0.75
CD9-207ENST00000538418 SEC24DO94855 1032 aaPredicted RBP10.37□□□□□ -0.75
CD9-207ENST00000538418 MBD4O95243 580 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 APEX1P27695 318 aaKnown RBP10.37□□□□□ -0.75
CD9-207ENST00000538418 THBS2P35442 1172 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 GRM1Q13255 1194 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 TAF12Q16514 161 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 AOC3Q16853 763 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 PRR23CQ6ZRP0 262 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 SUGP1Q8IWZ8 645 aaKnown RBP10.37□□□□□ -0.75
CD9-207ENST00000538418 TXLNBQ8N3L3 684 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 MSL3Q8N5Y2 521 aaKnown RBP10.37□□□□□ -0.75
CD9-207ENST00000538418 C1orf131Q8NDD1 294 aaKnown RBP10.37□□□□□ -0.75
CD9-207ENST00000538418 PEX11GQ96HA9 241 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 MRGPRX4Q96LA9 322 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 VRK1Q99986 396 aaPredicted RBP10.37□□□□□ -0.75
CD9-207ENST00000538418 BRIP1Q9BX63 1249 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 CNNM1Q9NRU3 951 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 GALNT8Q9NY28 637 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 DACT1Q9NYF0 836 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 KCMF1Q9P0J7 381 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 LRFN1Q9P244 771 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 MYO1AQ9UBC5 1043 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 RABGAP1Q9Y3P9 1069 aa10.37□□□□□ -0.75
CD9-207ENST00000538418 MROH1Q8NDA8 1641 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 SYNMO15061 1565 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 CUTAO60888 179 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 CHRNEQ04844 493 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 MGAT5Q09328 741 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 RALGPS1Q5JS13 557 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 CFAP161Q6P656 301 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 RAB24Q969Q5 203 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 SEC62Q99442 399 aaKnown RBP10.36□□□□□ -0.75
CD9-207ENST00000538418 SORBS1Q9BX66 1292 aaKnown RBP10.36□□□□□ -0.75
CD9-207ENST00000538418 CNTD2Q9H8S5 307 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 SARS2Q9NP81 518 aaKnown RBP10.36□□□□□ -0.75
CD9-207ENST00000538418 DTLQ9NZJ0 730 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 SLAMF8Q9P0V8 285 aa10.36□□□□□ -0.75
CD9-207ENST00000538418 FEZ2Q9UHY8 353 aaPredicted RBP10.36□□□□□ -0.75
CD9-207ENST00000538418 RPRD2Q5VT52 1461 aaKnown RBP10.36□□□□□ -0.75
CD9-207ENST00000538418 NOS1P29475 1434 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 NCOA3Q9Y6Q9 1424 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 NOTOA8MTQ0 251 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 ENDOD1O94919 500 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 FGFR2P21802 821 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 PRKCQQ04759 706 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 FOXO1Q12778 655 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 NFATC3Q12968 1075 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 TARDBPQ13148 414 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD9-207ENST00000538418 GJC2Q5T442 439 aaPredicted RBP10.35□□□□□ -0.75
CD9-207ENST00000538418 MZT2BQ6NZ67 158 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 BMP8AQ7Z5Y6 402 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 SPPL2CQ8IUH8 684 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 GIMAP8Q8ND71 665 aaPredicted RBP10.35□□□□□ -0.75
CD9-207ENST00000538418 HOXB13Q92826 284 aaPredicted RBP10.35□□□□□ -0.75
CD9-207ENST00000538418 MUL1Q969V5 352 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 TP53INP1Q96A56 240 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 UNC45AQ9H3U1 944 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 OBP2BQ9NPH6 170 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 SMC4Q9NTJ3 1288 aa10.35□□□□□ -0.75
CD9-207ENST00000538418 PIH1D1Q9NWS0 290 aaKnown RBP10.35□□□□□ -0.75
CD9-207ENST00000538418 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.35□□□□□ -0.75
CD9-207ENST00000538418 AFF4Q9UHB7 1163 aaKnown RBP10.35□□□□□ -0.75
CD9-207ENST00000538418 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
CD9-207ENST00000538418 UBR1Q8IWV7 1749 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 IRAK2O43187 625 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 AKR1B10O60218 316 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 ENO2P09104 434 aaPredicted RBP10.34□□□□□ -0.75
CD9-207ENST00000538418 SYN1P17600 705 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 EN2P19622 333 aaPredicted RBP10.34□□□□□ -0.75
CD9-207ENST00000538418 SLC6A9P48067 706 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 MPP1Q00013 466 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 IKZF1Q13422 519 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 RAB39AQ14964 217 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 TAF5Q15542 800 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 FAM180BQ6P0A1 224 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 FAM129CQ86XR2 697 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 COLGALT2Q8IYK4 626 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 C18orf8Q96DM3 657 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 MRGPRX1Q96LB2 322 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 MANSC1Q9H8J5 431 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 GJB4Q9NTQ9 266 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 STK32BQ9NY57 414 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 HSPBP1Q9NZL4 362 aa10.34□□□□□ -0.75
CD9-207ENST00000538418 LMCD1Q9NZU5 365 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms