RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 HPSEQ9Y251 543 aa18.89■□□□□ 0.61
GPN3-202ENST00000537466 HCFC2Q9Y5Z7 792 aa18.89■□□□□ 0.61
GPN3-202ENST00000537466 GRXCR2A6NFK2 248 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 OGTO15294 1046 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 ACTN4O43707 911 aaKnown RBP18.88■□□□□ 0.61
GPN3-202ENST00000537466 CLTAP09496 248 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 GLUD2P49448 558 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 KIAA0319Q5VV43 1072 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 TMEM184AQ6ZMB5 413 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 TMEM130Q8N3G9 435 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 C18orf25Q96B23 403 aaPredicted RBP18.88■□□□□ 0.61
GPN3-202ENST00000537466 MRPL17Q9NRX2 175 aaKnown RBP18.88■□□□□ 0.61
GPN3-202ENST00000537466 CHST7Q9NS84 486 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 CD207Q9UJ71 328 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 STYXL1Q9Y6J8 313 aa18.88■□□□□ 0.61
GPN3-202ENST00000537466 TTC26A0AVF1 554 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 FSD2A1L4K1 749 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 PRPF6O94906 941 aaKnown RBP18.87■□□□□ 0.61
GPN3-202ENST00000537466 URODP06132 367 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 CNPP09543 421 aaKnown RBP18.87■□□□□ 0.61
GPN3-202ENST00000537466 ADSSP30520 456 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 SPAG1Q07617 926 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 CUL4BQ13620 913 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 ENOX2Q16206 610 aaKnown RBP18.87■□□□□ 0.61
GPN3-202ENST00000537466 UPP1Q16831 310 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 CD300LGQ6UXG3 332 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 C3orf58Q8NDZ4 430 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 KLHL5Q96PQ7 755 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 ACCSQ96QU6 501 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 PYM1Q9BRP8 204 aaKnown RBP18.87■□□□□ 0.61
GPN3-202ENST00000537466 PCDHB13Q9Y5F0 798 aa18.87■□□□□ 0.61
GPN3-202ENST00000537466 SF3B1O75533 1304 aaKnown RBP eCLIP18.86■□□□□ 0.616e-10■■■■■ 187.2
GPN3-202ENST00000537466 MBTPS2O43462 519 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 SLFN14P0C7P3 912 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 NDUFA8P51970 172 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 DSG1Q02413 1049 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 CEP57L1Q8IYX8 460 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 UROC1Q96N76 676 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 UHRF1Q96T88 793 aaPredicted RBP18.86■□□□□ 0.61
GPN3-202ENST00000537466 SLC38A7Q9NVC3 462 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 CPSF3Q9UKF6 684 aaKnown RBP18.86■□□□□ 0.61
GPN3-202ENST00000537466 C2orf16Q68DN1 1984 aa18.86■□□□□ 0.61
GPN3-202ENST00000537466 FAM237AA0A1B0GTK4 181 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 LACTBL1A8MY62 500 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 TMEM189-UBE2V1I3L0A0 370 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 B3GAT3O94766 335 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 EPCAMP16422 314 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 ACOT2P49753 483 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 EHHADHQ08426 723 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 ALCAMQ13740 583 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 KYAT1Q16773 422 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 USP41Q3LFD5 358 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 PUS10Q3MIT2 529 aaKnown RBP18.85■□□□□ 0.61
GPN3-202ENST00000537466 RTP2Q5QGT7 225 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 SLFN12LQ6IEE8 588 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 KIAA1841Q6NSI8 718 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 ANKRD54Q6NXT1 300 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 UNC13DQ70J99 1090 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 TMEM87AQ8NBN3 555 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 SMRP1Q8NCR6 262 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 SLC22A17Q8WUG5 538 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 POMGNT1Q8WZA1 660 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 PAGE5Q96GU1 130 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 GOLPH3LQ9H4A5 285 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 RPF1Q9H9Y2 349 aaKnown RBP18.85■□□□□ 0.61
GPN3-202ENST00000537466 PLEKHA5Q9HAU0 1116 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 TUBGCP4Q9UGJ1 667 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 AGO2Q9UKV8 859 aaKnown RBP18.85■□□□□ 0.61
GPN3-202ENST00000537466 EXOC7Q9UPT5 735 aa18.85■□□□□ 0.61
GPN3-202ENST00000537466 A0A1W2PQ27 194 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 A0A1W2PQ64 194 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 A0A1W2PQD8 194 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 PODXLO00592 558 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 PPP2R3AQ06190 1150 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 SMAD4Q13485 552 aaKnown RBP18.84■□□□□ 0.61
GPN3-202ENST00000537466 FAM171A1Q5VUB5 890 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 SYCE2Q6PIF2 218 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 DCLRE1AQ6PJP8 1040 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 FSIP1Q8NA03 581 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 ZSWIM2Q8NEG5 633 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 RIN2Q8WYP3 895 aaPredicted RBP18.84■□□□□ 0.61
GPN3-202ENST00000537466 CASP10Q92851 521 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 KIF12Q96FN5 646 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 APOL5Q9BWW9 433 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 EMILIN2Q9BXX0 1053 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 SSX2IPQ9Y2D8 614 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 TEX28O15482 410 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 ADRB2P07550 413 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 SRGAP2BP0DMP2 458 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 KLRC2P26717 231 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 HOXD13P35453 343 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 SYKP43405 635 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 BRCC3P46736 316 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 CLCN4P51793 760 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 ZBTB6Q15916 424 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 FAM26FQ5R3K3 315 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 PRSS55Q6UWB4 352 aaPredicted RBP18.84■□□□□ 0.61
GPN3-202ENST00000537466 CRELD2Q6UXH1 353 aaPredicted RBP18.84■□□□□ 0.61
GPN3-202ENST00000537466 EPM2AIP1Q7L775 607 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms