RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-208ENST00000537315 B3GAT3O94766 335 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 BRD1O95696 1058 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 TKTP29401 623 aaKnown RBP13.15□□□□□ -0.3
RFC5-208ENST00000537315 NMT1P30419 496 aaKnown RBP13.15□□□□□ -0.3
RFC5-208ENST00000537315 TNFSF9P41273 254 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 BRCC3P46736 316 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 ZNF131P52739 623 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 SPAG1Q07617 926 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 PTPN21Q16825 1174 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 CD300LGQ6UXG3 332 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 HFE2Q6ZVN8 426 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 GPR149Q86SP6 731 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 SNX21Q969T3 373 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 NTPCRQ9BSD7 190 aaKnown RBP13.15□□□□□ -0.3
RFC5-208ENST00000537315 IKZF4Q9H2S9 585 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.15□□□□□ -0.3
RFC5-208ENST00000537315 CNTN3Q9P232 1028 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
RFC5-208ENST00000537315 A0A087X0B3 334 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 TISP43B9A030 160 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 TMEM189-UBE2V1I3L0A0 370 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 PODXLO00592 558 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 ASGR2P07307 311 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 TXLNAP40222 546 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 LIG4P49917 911 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 ZXDAP98168 799 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 MCL1Q07820 350 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 UPP1Q16831 310 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 FOXD4L6Q3SYB3 417 aaPredicted RBP13.14□□□□□ -0.31
RFC5-208ENST00000537315 ZC2HC1CQ53FD0 456 aaPredicted RBP13.14□□□□□ -0.31
RFC5-208ENST00000537315 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 ATAT1Q5SQI0 421 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 FOXD4L3Q6VB84 417 aaPredicted RBP13.14□□□□□ -0.31
RFC5-208ENST00000537315 ZPBP2Q6X784 338 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
RFC5-208ENST00000537315 CCDC149Q6ZUS6 474 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 LNX1Q8TBB1 728 aaPredicted RBP13.14□□□□□ -0.31
RFC5-208ENST00000537315 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 EDAQ92838 391 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
RFC5-208ENST00000537315 FIZ1Q96SL8 496 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 CLSTN3Q9BQT9 956 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 FNIP2Q9P278 1114 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 TBX20Q9UMR3 447 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 HCN4Q9Y3Q4 1203 aa13.14□□□□□ -0.31
RFC5-208ENST00000537315 CLUHO75153 1309 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 CCDC195A0A1B0GUA6 201 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 MYMKA6NI61 221 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 H0YCG3 227 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 CLDN3O15551 220 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 TRAK2O60296 914 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
RFC5-208ENST00000537315 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
RFC5-208ENST00000537315 CREMQ03060 361 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 SLC39A14Q15043 492 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 STK38Q15208 465 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 TRIM67Q6ZTA4 783 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
RFC5-208ENST00000537315 SMG7Q92540 1137 aaKnown RBP13.13□□□□□ -0.31
RFC5-208ENST00000537315 ZNF707Q96C28 371 aaPredicted RBP13.13□□□□□ -0.31
RFC5-208ENST00000537315 UROC1Q96N76 676 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 ZSCAN16Q9H4T2 348 aaPredicted RBP13.13□□□□□ -0.31
RFC5-208ENST00000537315 SLC38A7Q9NVC3 462 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 FBXW11Q9UKB1 542 aa13.13□□□□□ -0.31
RFC5-208ENST00000537315 TMEM221A6NGB7 291 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 M0R296 226 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 FAM189A1O60320 539 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 N4BP1O75113 896 aaKnown RBP13.12□□□□□ -0.31
RFC5-208ENST00000537315 KCNE1P15382 129 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 FGFR3P22607 806 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 DDIT3P35638 169 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 STAT6P42226 847 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 GUCY2FP51841 1108 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
RFC5-208ENST00000537315 PKP1Q13835 747 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 LILRA6Q6PI73 481 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 RSPO2Q6UXX9 243 aaPredicted RBP13.12□□□□□ -0.31
RFC5-208ENST00000537315 C15orf39Q6ZRI6 1047 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 PDILTQ8N807 584 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 KREMEN2Q8NCW0 462 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 CMASQ8NFW8 434 aaPredicted RBP13.12□□□□□ -0.31
RFC5-208ENST00000537315 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
RFC5-208ENST00000537315 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms