RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PI4K2BQ8TCG2 481 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 CHFRQ96EP1 664 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 TRPV4Q9HBA0 871 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 POLMQ9NP87 494 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-217ENST00000537162 MAFBQ9Y5Q3 323 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-217ENST00000537162 PTPRQQ9UMZ3 2332 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 FAM149AA5PLN7 773 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 CHADO15335 359 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 DHX15O43143 795 aaKnown RBP10.69□□□□□ -0.7
CPSF7-217ENST00000537162 SLC28A2O43868 658 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 RNF40O75150 1001 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 PCP11498 1178 aaKnown RBP10.69□□□□□ -0.7
CPSF7-217ENST00000537162 SFPQP23246 707 aaKnown RBP eCLIP10.69□□□□□ -0.7
CPSF7-217ENST00000537162 OR1D2P34982 312 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 PTGER3P43115 390 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 CSRP3P50461 194 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 DGKEP52429 567 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 RAB33AQ14088 237 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 C1orf228Q6PIY5 440 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 CATSPER4Q7RTX7 472 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 TMPRSS7Q7RTY8 843 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 KSR1Q8IVT5 923 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 FAM200AQ8TCP9 573 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 FAM227BQ96M60 508 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 ARID3AQ99856 593 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 TRIM4Q9C037 500 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 PCDHA6Q9UN73 950 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 HES2Q9Y543 173 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 PCDHA8Q9Y5H6 950 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 FBN2P35556 2912 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 ABCA12Q86UK0 2595 aa10.69□□□□□ -0.7
CPSF7-217ENST00000537162 ZMYM6O95789 1325 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 A0A0D9SFI3 127 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 CAPN8A6NHC0 703 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 TLX3O43711 291 aaPredicted RBP10.68□□□□□ -0.7
CPSF7-217ENST00000537162 OPHN1O60890 802 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 EGFP01133 1207 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 KIF5BP33176 963 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 CCR10P46092 362 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 FCHO2Q0JRZ9 810 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 LY6DQ14210 128 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 SEC23AQ15436 765 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 CCDC178Q5BJE1 867 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 IFIT1BQ5T764 474 aaKnown RBP10.68□□□□□ -0.7
CPSF7-217ENST00000537162 FAM171A1Q5VUB5 890 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 SLC23A3Q6PIS1 610 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 GPR155Q7Z3F1 870 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 YAF2Q8IY57 180 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 MINDY1Q8N5J2 469 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 FRMD1Q8N878 549 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 GSTCDQ8NEC7 633 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 PGBD1Q96JS3 809 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 TTPALQ9BTX7 342 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 SENP2Q9HC62 589 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 FBRSL1Q9HCM7 1045 aaKnown RBP10.68□□□□□ -0.7
CPSF7-217ENST00000537162 AGPAT5Q9NUQ2 364 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 EBF1Q9UH73 591 aa10.68□□□□□ -0.7
CPSF7-217ENST00000537162 SPTAN1Q13813 2472 aaKnown RBP10.68□□□□□ -0.7
CPSF7-217ENST00000537162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 TEX51A0A1B0GUA7 166 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 ATG13O75143 517 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 TADA2AO75478 443 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 APBB3O95704 486 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 CFIP05156 583 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 ITGA4P13612 1032 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 IGFBP6P24592 240 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-217ENST00000537162 HOXA11P31270 313 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-217ENST00000537162 TMEM196Q5HYL7 178 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 NAIF1Q69YI7 327 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-217ENST00000537162 MIS18BP1Q6P0N0 1132 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 OTUD7AQ8TE49 926 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-217ENST00000537162 TMEM209Q96SK2 561 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 EIF2AQ9BY44 585 aaKnown RBP10.67□□□□□ -0.7
CPSF7-217ENST00000537162 RNF41Q9H4P4 317 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-217ENST00000537162 ANKMY1Q9P2S6 941 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 GABBR1Q9UBS5 961 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
CPSF7-217ENST00000537162 FLNCQ14315 2725 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 SF3B1O75533 1304 aaKnown RBP eCLIP10.66□□□□□ -0.77e-6■■■■■ 28.7
CPSF7-217ENST00000537162 MICAL2O94851 1124 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 KIF4AO95239 1232 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 HNRNPDQ14103 355 aaKnown RBP10.66□□□□□ -0.7
CPSF7-217ENST00000537162 DMC1Q14565 340 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 TEAD2Q15562 447 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 MAPK6Q16659 721 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 TAF1BQ53T94 588 aaPredicted RBP10.66□□□□□ -0.7
CPSF7-217ENST00000537162 SYT12Q8IV01 421 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 GPATCH3Q96I76 525 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 SH2D3AQ9BRG2 576 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 MINDY3Q9H8M7 445 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 PSTPIP2Q9H939 334 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 TOR4AQ9NXH8 423 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 NXF1Q9UBU9 619 aaKnown RBP10.66□□□□□ -0.7
CPSF7-217ENST00000537162 IL17BQ9UHF5 180 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 APOBEC2Q9Y235 224 aaKnown RBP10.66□□□□□ -0.7
CPSF7-217ENST00000537162 IPPQ9Y573 584 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 PCDHB9Q9Y5E1 797 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 CDY1Q9Y6F8 540 aa10.66□□□□□ -0.7
CPSF7-217ENST00000537162 CEP192Q8TEP8 1941 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms