RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 GLRA4Q5JXX5 417 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 FKBP15Q5T1M5 1219 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 KRT39Q6A163 491 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 TMEM130Q8N3G9 435 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 GSTCDQ8NEC7 633 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
CDCA3-206ENST00000536241 KIF12Q96FN5 646 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 RSAD1Q9HA92 442 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 CITO14578 2027 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 TANC1Q9C0D5 1861 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 ABHD14A-ACY1A0A1B0GW23 586 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 ARL5CA6NH57 179 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 PHACTR2O75167 634 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 OFD1O75665 1012 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 FGBP02675 491 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 TPM3P06753 285 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 TMEM191BP0C7N4 346 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 SLC9A1P19634 815 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 MLH1P40692 756 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 KLK7P49862 253 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 PPIGQ13427 754 aaKnown RBP eCLIP12.46□□□□□ -0.421e-6■■■■□ 25.5
CDCA3-206ENST00000536241 BIRC3Q13489 604 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 SYCP1Q15431 976 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 ZBTB6Q15916 424 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 TDRD10Q5VZ19 366 aaKnown RBP12.46□□□□□ -0.42
CDCA3-206ENST00000536241 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 ZNF365Q70YC5 407 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 OTOP2Q7RTS6 562 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 TRAPPC11Q7Z392 1133 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 EHBP1Q8NDI1 1231 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 MRFAP1L1Q96HT8 127 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 ANKRD36BP1Q96IX9 119 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 MTMR12Q9C0I1 747 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 ELAC1Q9H777 363 aaKnown RBP12.46□□□□□ -0.42
CDCA3-206ENST00000536241 UBN1Q9NPG3 1134 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 ANK1P16157 1881 aa12.46□□□□□ -0.42
CDCA3-206ENST00000536241 MKI67P46013 3256 aaKnown RBP12.45□□□□□ -0.42
CDCA3-206ENST00000536241 PTGESO14684 152 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 N4BP1O75113 896 aaKnown RBP12.45□□□□□ -0.42
CDCA3-206ENST00000536241 UPP2O95045 317 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 PFKMP08237 780 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 FGFR1P11362 822 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 KCNE1P15382 129 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 PBX1P40424 430 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 MXI1P50539 228 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 GUCY2FP51841 1108 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 AP3M2P53677 418 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 EPHB4P54760 987 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 ZACNQ401N2 412 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 CRIPAKQ8N1N5 446 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 HELQQ8TDG4 1101 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 TAS1R2Q8TE23 839 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 ANP32BQ92688 251 aaKnown RBP12.45□□□□□ -0.42
CDCA3-206ENST00000536241 SEMA4DQ92854 862 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 C18orf25Q96B23 403 aaPredicted RBP12.45□□□□□ -0.42
CDCA3-206ENST00000536241 PCMTD1Q96MG8 357 aaPredicted RBP12.45□□□□□ -0.42
CDCA3-206ENST00000536241 ERGIC2Q96RQ1 377 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 RPS6KC1Q96S38 1066 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.45□□□□□ -0.428e-7■■■■■ 69.9
CDCA3-206ENST00000536241 DPP3Q9NY33 737 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 LRFN2Q9ULH4 789 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 PLAGL2Q9UPG8 496 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 INPP5FQ9Y2H2 1132 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 COQ4Q9Y3A0 265 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 C2CD2Q9Y426 696 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 TTC3P53804 2025 aa12.45□□□□□ -0.42
CDCA3-206ENST00000536241 A0A1W2PQC6 194 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 GTPBP10A4D1E9 387 aaKnown RBP12.44□□□□□ -0.42
CDCA3-206ENST00000536241 PMM2O15305 246 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 P4HA2O15460 535 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 VNN1O95497 513 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 POMCP01189 267 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 TNNC2P02585 160 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 THP07101 528 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 ACTN1P12814 892 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 PON1P27169 355 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 SCNN1GP51170 649 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 MYL7Q01449 175 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 APBA1Q02410 837 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 CETN1Q12798 172 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 EXOC3L4Q17RC7 722 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 CLLU1OSQ5K130 101 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 TMEM240Q5SV17 173 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 VSTM4Q8IW00 320 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 DRC7Q8IY82 874 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 FBXL13Q8NEE6 735 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 ELMO3Q96BJ8 720 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 PPP1R10Q96QC0 940 aaKnown RBP12.44□□□□□ -0.42
CDCA3-206ENST00000536241 TSPAN18Q96SJ8 248 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 LBHD1Q9BQE6 289 aaPredicted RBP12.44□□□□□ -0.42
CDCA3-206ENST00000536241 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms