RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 ASS1P00966 412 aaKnown RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 CYP1A2P05177 515 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF286BP0CG31 522 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 HOXA11P31270 313 aaPredicted RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 TNFSF9P41273 254 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 LIG4P49917 911 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 TUBB4BP68371 445 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 PTP4A2Q12974 167 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 STRN3Q13033 797 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 RAPGEF1Q13905 1077 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 TFDP1Q14186 410 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ZBTB6Q15916 424 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 CCL14Q16627 93 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ARHGAP29Q52LW3 1261 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 SRLQ86TD4 932 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF677Q86XU0 584 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 EFCAB13Q8IY85 973 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 RUBCNQ92622 972 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 CD101Q93033 1021 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ZIC5Q96T25 663 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 AGPAT1Q99943 283 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 FAM213AQ9BRX8 229 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 CDT1Q9H211 546 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 TUT1Q9H6E5 874 aaKnown RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ANKZF1Q9H8Y5 726 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 RRN3P2A6NIE6 340 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 NOP56O00567 594 aaKnown RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 CLCN6P51797 869 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 PURAQ00577 322 aaKnown RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 SP4Q02446 784 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 MGAT3Q09327 533 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 KLHDC9Q8NEP7 349 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 LMBR1Q8WVP7 490 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 HES6Q96HZ4 224 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 CCDC43Q96MW1 224 aaKnown RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ADAMTS4O75173 837 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 ASPAP45381 313 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 TNFAIP2Q03169 654 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 SURF1Q15526 300 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 KYAT1Q16773 422 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 TSR1Q2NL82 804 aaKnown RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 LRRC71Q8N4P6 559 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 OR6J1Q8NGC5 347 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 OR5B17Q8NGF7 314 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 TPCN2Q8NHX9 752 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 RBAKQ9NYW8 714 aaPredicted RBP8.61□□□□□ -1.03
COL21A1-212ENST00000535941 SIX4Q9UIU6 781 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 DERAQ9Y315 318 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 PTPRSQ13332 1948 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 B4GALT5O43286 388 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 ZRANB2O95218 330 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL21A1-212ENST00000535941 IL18RAPO95256 599 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 GJB1P08034 283 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 CLTAP09496 248 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 SMIM10L2AP0DMW4 78 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 SMIM10L2BP0DMW5 78 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 MAGEA1P43355 309 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 CLCN3P51790 818 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 MAP2K1Q02750 393 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-212ENST00000535941 KIF5AQ12840 1032 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 MKRN3Q13064 507 aaKnown RBP8.6□□□□□ -1.03
COL21A1-212ENST00000535941 C11orf63Q6NUN7 778 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 USP37Q86T82 979 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 SMC1BQ8NDV3 1235 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 SLC20A1Q8WUM9 679 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 ZBTB10Q96DT7 871 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TSPAN18Q96SJ8 248 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 MSTO1Q9BUK6 570 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 ZFYVE28Q9HCC9 887 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 ADAMTS1Q9UHI8 967 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 LRRIQ4A6NIV6 560 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 GPR25O00155 361 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 PDE2AO00408 941 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-212ENST00000535941 MOCS3O95396 460 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 CYP11B1P15538 503 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 MFAP3P55082 362 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 CDC42EP1Q00587 391 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 CDR2Q01850 454 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 SPA17Q15506 151 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TAF1CQ15572 869 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-212ENST00000535941 ATF7IP2Q5U623 682 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 EEF1DP3Q658K8 133 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TLK2Q86UE8 772 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 NT5DC4Q86YG4 428 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 RNF149Q8NC42 400 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 UBXN4Q92575 508 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 RABGGTAQ92696 567 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TAF4BQ92750 862 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TATDN2Q93075 761 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TAS2R14Q9NYV8 317 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 COG5Q9UP83 839 aa8.6□□□□□ -1.03
COL21A1-212ENST00000535941 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
COL21A1-212ENST00000535941 PES1O00541 588 aaKnown RBP8.59□□□□□ -1.03
COL21A1-212ENST00000535941 DDX3YO15523 660 aaKnown RBP8.59□□□□□ -1.03
COL21A1-212ENST00000535941 DUSP11O75319 330 aaKnown RBP8.59□□□□□ -1.03
COL21A1-212ENST00000535941 HLA-DRAP01903 254 aa8.59□□□□□ -1.03
COL21A1-212ENST00000535941 MARK3P27448 753 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms