RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 CLCN4P51793 760 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 ZNF131P52739 623 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 SMTNP53814 917 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 NCKAP1LP55160 1127 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 CEBPZQ03701 1054 aaKnown RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 ITIH3Q06033 890 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 STRN3Q13033 797 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 DHX8Q14562 1220 aaKnown RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 MCM6Q14566 821 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 MPZL3Q6UWV2 235 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 HFE2Q6ZVN8 426 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 HSCBQ8IWL3 235 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 C12orf76Q8N812 135 aaPredicted RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 HASPINQ8TF76 798 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 LARP4BQ92615 738 aaKnown RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 KCNN1Q92952 543 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 CLIC6Q96NY7 704 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 PPP1R10Q96QC0 940 aaKnown RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 USP28Q96RU2 1077 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 PHOX2BQ99453 314 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 PRRX2Q99811 253 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 ZSCAN16Q9H4T2 348 aaPredicted RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 RXFP1Q9HBX9 757 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 TOPORSQ9NS56 1045 aaPredicted RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 LARSQ9P2J5 1176 aaKnown RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 ANKFY1Q9P2R3 1169 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 MUTYHQ9UIF7 546 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 SSX2IPQ9Y2D8 614 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 SRPRBQ9Y5M8 271 aaKnown RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
CHD4-204ENST00000535810 SPTBN4Q9H254 2564 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 MYH11P35749 1972 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 SMIM28A0A1B0GU29 152 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 H0YCG3 227 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 MEFVO15553 781 aaPredicted RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 TADA2AO75478 443 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 FAM13AO94988 1023 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 KRT18P05783 430 aaKnown RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 ADH1AP07327 375 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 WEE2P0C1S8 567 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 HARSP12081 509 aaKnown RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 NASPP49321 788 aaPredicted RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 YARSP54577 528 aaKnown RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 PTPN5P54829 565 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 OSTNP61366 133 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 NOLC1Q14978 699 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD4-204ENST00000535810 SLC39A14Q15043 492 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 USP41Q3LFD5 358 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 XKR4Q5GH76 650 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 RTP2Q5QGT7 225 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 RARS2Q5T160 578 aaKnown RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 KIAA1841Q6NSI8 718 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 CES5AQ6NT32 575 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 KANK3Q6NY19 840 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 ALKAL1Q6UXT8 129 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 ZPBP2Q6X784 338 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 HAUS6Q7Z4H7 955 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 RNF135Q8IUD6 432 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 GPR65Q8IYL9 337 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 FEZF2Q8TBJ5 459 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 RIN2Q8WYP3 895 aaPredicted RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 ZBTB45Q96K62 511 aaPredicted RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 RPGRIP1Q96KN7 1286 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 ZMAT2Q96NC0 199 aaKnown RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 NECTIN4Q96NY8 510 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 TCHPQ9BT92 498 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 CCDC94Q9BW85 323 aaPredicted RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 POMKQ9H5K3 350 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 PTPRZ1P23471 2315 aaPredicted RBP9.68□□□□□ -0.86
CHD4-204ENST00000535810 ZNF318Q5VUA4 2279 aa9.68□□□□□ -0.86
CHD4-204ENST00000535810 TECTAO75443 2155 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 K7ENM7 598 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 HNRNPDLO14979 420 aaKnown RBP9.67□□□□□ -0.86
CHD4-204ENST00000535810 TBCAO75347 108 aaKnown RBP9.67□□□□□ -0.86
CHD4-204ENST00000535810 GLUD1P00367 558 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 KCNE1P15382 129 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 SCP2P22307 547 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 SP100P23497 879 aaPredicted RBP9.67□□□□□ -0.86
CHD4-204ENST00000535810 IGFBP6P24592 240 aaPredicted RBP9.67□□□□□ -0.86
CHD4-204ENST00000535810 DDIT3P35638 169 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 TXLNAP40222 546 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 CLCNKBP51801 687 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 SOX4Q06945 474 aaPredicted RBP9.67□□□□□ -0.86
CHD4-204ENST00000535810 MCL1Q07820 350 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 HERC4Q5GLZ8 1057 aaPredicted RBP9.67□□□□□ -0.86
CHD4-204ENST00000535810 FAM171A1Q5VUB5 890 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 TMC5Q6UXY8 1006 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 MYCT1Q8N699 235 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 RIPOR3Q96MK2 946 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 FIZ1Q96SL8 496 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 HAPLN2Q9GZV7 340 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 GOLGA2P5Q9HBQ8 144 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 MAN1C1Q9NR34 630 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD4-204ENST00000535810 CNTN3Q9P232 1028 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms