RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 NAGPAQ9UK23 515 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 NENFQ9UMX5 172 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 GINS2Q9Y248 185 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 PTPN22Q9Y2R2 807 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 MACROD2A1Z1Q3 448 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 HLA-DRAP01903 254 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 ARF4P18085 180 aaPredicted RBP22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 PRMT2P55345 433 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 CDC42EP1Q00587 391 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 BIRC3Q13489 604 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 KIZQ2M2Z5 673 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 WDR49Q8IV35 697 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 CEP120Q8N960 986 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 DNAJB3Q8WWF6 145 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 SHC3Q92529 594 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 ELMO3Q96BJ8 720 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 UNC93B1Q9H1C4 597 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 PDZD7Q9H5P4 517 aa22.61■■□□□ 1.21
PDXDC1-205ENST00000535621 C17orf102A2RUQ5 167 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 DDX3XO00571 662 aaKnown RBP eCLIP22.6■■□□□ 1.212e-13■□□□□ 8.8
PDXDC1-205ENST00000535621 TSPAN1O60635 241 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 GPR32O75388 356 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 GCNT1Q02742 428 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 C10orf76Q5T2E6 689 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 FAM71AQ8IYT1 594 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 SECISBP2LQ93073 1101 aaKnown RBP22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 CPB2Q96IY4 423 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 KPNA6O60684 536 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 FGFR4P22455 802 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 HOXC8P31273 242 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 PIK3CAP42336 1068 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 AP3M2P53677 418 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 MTFR1Q15390 333 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 NAB2Q15742 525 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 FAM47CQ5HY64 1035 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 GDF6Q6KF10 455 aaPredicted RBP22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 SLC30A5Q8TAD4 765 aa22.6■■□□□ 1.21
PDXDC1-205ENST00000535621 CTAGE9A4FU28 777 aa22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 MCF2P10911 925 aa22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 CST5P28325 142 aaPredicted RBP22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 OSTNP61366 133 aa22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 SURF1Q15526 300 aa22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 ALKBH5Q6P6C2 394 aaKnown RBP22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 WNT8BQ93098 351 aa22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 SALL4Q9UJQ4 1053 aa22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 ANK1P16157 1881 aa22.59■■□□□ 1.21
PDXDC1-205ENST00000535621 ERLIN2O94905 339 aa22.58■■□□□ 1.21
PDXDC1-205ENST00000535621 WDR44Q5JSH3 913 aa22.58■■□□□ 1.21
PDXDC1-205ENST00000535621 LNX1Q8TBB1 728 aaPredicted RBP22.58■■□□□ 1.21
PDXDC1-205ENST00000535621 FAM212AQ96EL1 285 aa22.58■■□□□ 1.21
PDXDC1-205ENST00000535621 NAPGQ99747 312 aaPredicted RBP22.58■■□□□ 1.21
PDXDC1-205ENST00000535621 PACSIN1Q9BY11 444 aa22.58■■□□□ 1.21
PDXDC1-205ENST00000535621 C1orf112Q9NSG2 853 aa22.58■■□□□ 1.21
PDXDC1-205ENST00000535621 A0A1B0GUA9 196 aa22.58■■□□□ 1.2
PDXDC1-205ENST00000535621 ENOSF1Q7L5Y1 443 aa22.58■■□□□ 1.2
PDXDC1-205ENST00000535621 GLYCTKQ8IVS8 523 aa22.58■■□□□ 1.2
PDXDC1-205ENST00000535621 TMEM192Q8IY95 271 aa22.58■■□□□ 1.2
PDXDC1-205ENST00000535621 FAM81BQ96LP2 452 aa22.58■■□□□ 1.2
PDXDC1-205ENST00000535621 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.58■■□□□ 1.24e-6■□□□□ 9.4
PDXDC1-205ENST00000535621 GTF2IRD1Q9UHL9 959 aa22.58■■□□□ 1.2
PDXDC1-205ENST00000535621 B4GALT4O60513 344 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 ACLYP53396 1101 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 GCOM2Q9BZD3 368 aaPredicted RBP22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 MTMR12Q9C0I1 747 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 MRFAP1Q9Y605 127 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 CTIFO43310 598 aaKnown RBP22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 CXCL8P10145 99 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 USP8P40818 1118 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 NCOA4Q13772 614 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 RNF180Q86T96 592 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 OSMRQ99650 979 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 RPF1Q9H9Y2 349 aaKnown RBP22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 CAPN6Q9Y6Q1 641 aa22.57■■□□□ 1.2
PDXDC1-205ENST00000535621 CYP26A1O43174 497 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 CLTAP09496 248 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 STAG3L1P0CL83 205 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 DUOXA2Q1HG44 320 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 SCARA3Q6AZY7 606 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 SPOPLQ6IQ16 392 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 TRAPPC11Q7Z392 1133 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 EFCAB13Q8IY85 973 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 RNF10Q8N5U6 811 aaKnown RBP22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 DHX38Q92620 1227 aaKnown RBP22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 ARID3AQ99856 593 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 AGPAT1Q99943 283 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 APOBEC3GQ9HC16 384 aaKnown RBP22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 ATP8B3O60423 1300 aa22.56■■□□□ 1.2
PDXDC1-205ENST00000535621 PHACTR2O75167 634 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 IL18RAPO95256 599 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 SLU7O95391 586 aaKnown RBP22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 MOCS3O95396 460 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 GNAT1P11488 350 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 POU5F1Q01860 360 aaKnown RBP22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 PCSK9Q8NBP7 692 aaKnown RBP22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 TRIM58Q8NG06 486 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 EPS8L1Q8TE68 723 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 U2AF1L4Q8WU68 220 aaKnown RBP22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 SLC20A1Q8WUM9 679 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 TMEM40Q8WWA1 233 aa22.55■■□□□ 1.2
PDXDC1-205ENST00000535621 NOCTQ9UK39 431 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms