RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 BMP15O95972 392 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 MCF2P10911 925 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 PLS3P13797 630 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 UBA7P41226 1012 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■■■■□ 20.4
SFSWAP-202ENST00000535202 CLCNKBP51801 687 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 SMTNP53814 917 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 ELAVL2Q12926 359 aaKnown RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 CUL4AQ13619 759 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 DHX8Q14562 1220 aaKnown RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 PDCD11Q14690 1871 aaKnown RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 SF3A1Q15459 793 aaKnown RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 PSMD5Q16401 504 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 MPZL3Q6UWV2 235 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 OTOP3Q7RTS5 596 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 BMP8AQ7Z5Y6 402 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 GPR65Q8IYL9 337 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 KCTD17Q8N5Z5 321 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 SPIRE2Q8WWL2 714 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 SMG7Q92540 1137 aaKnown RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 ASIC4Q96FT7 647 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 ZBTB45Q96K62 511 aaPredicted RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 AK8Q96MA6 479 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 ACAP3Q96P50 834 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 GZF1Q9H116 711 aaPredicted RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 PIDD1Q9HB75 910 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 PTPRHQ9HD43 1115 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 TOPORSQ9NS56 1045 aaPredicted RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 KCND2Q9NZV8 630 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 ANKFY1Q9P2R3 1169 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 USTQ9Y2C2 406 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 R3HCC1Q9Y3T6 440 aaKnown RBP9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 CLUHO75153 1309 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 SMIM28A0A1B0GU29 152 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 TMEM189-UBE2V1I3L0A0 370 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 SLC26A4O43511 780 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 MAPTP10636 758 aaKnown RBP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 PLCG1P19174 1290 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 PROZP22891 400 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 GBP2P32456 591 aaPredicted RBP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 GRIN1Q05586 938 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 SOX4Q06945 474 aaPredicted RBP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 NOLC1Q14978 699 aaKnown RBP eCLIP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 KARSQ15046 597 aaKnown RBP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 UPP1Q16831 310 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 SEZ6Q53EL9 994 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 PDXDC1Q6P996 788 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 DCLRE1AQ6PJP8 1040 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 GPBP1Q86WP2 473 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 CREBRFQ8IUR6 639 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 UBALD2Q8IYN6 164 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 FBXL6Q8N531 539 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 TMEM161BQ8NDZ6 487 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 LNX1Q8TBB1 728 aaPredicted RBP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 LRRC15Q8TF66 581 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 HDAC7Q8WUI4 952 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 PIK3R5Q8WYR1 880 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 STAMQ92783 540 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 BICD1Q96G01 975 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 SNX27Q96L92 541 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 UROC1Q96N76 676 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 CLSTN3Q9BQT9 956 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 REEP2Q9BRK0 252 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 TSPYL1Q9H0U9 437 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 PLEKHA4Q9H4M7 779 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 WDR6Q9NNW5 1121 aaKnown RBP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 FOXD4L1Q9NU39 408 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 SLC38A7Q9NVC3 462 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 ZDHHC7Q9NXF8 308 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 LARSQ9P2J5 1176 aaKnown RBP9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 KCNG1Q9UIX4 513 aa9.34□□□□□ -0.91
SFSWAP-202ENST00000535202 H0YCG3 227 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 I3L4J1 428 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 K7ENM7 598 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 PODXLO00592 558 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ABLIM1O14639 778 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 TOM1L1O75674 476 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ZMYND10O75800 440 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 FAM13AO94988 1023 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 C1RP00736 705 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 PDGFBP01127 241 aaPredicted RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 PDCP20941 246 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 FGFR3P22607 806 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 IGFBP6P24592 240 aaPredicted RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 TKTP29401 623 aaKnown RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 LONP1P36776 959 aaKnown RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 BRCC3P46736 316 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 VCPP55072 806 aaKnown RBP9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 NCKAP1LP55160 1127 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 MCM6Q14566 821 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ARSHQ5FYA8 562 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 XKR4Q5GH76 650 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 LIN9Q5TKA1 542 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 LILRA6Q6PI73 481 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 CD300LGQ6UXG3 332 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 ALKAL1Q6UXT8 129 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 CYP26C1Q6V0L0 522 aa9.33□□□□□ -0.92
SFSWAP-202ENST00000535202 GET4Q7L5D6 327 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms