RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 HNRNPA1P09651 372 aaKnown RBP eCLIP23.51■■□□□ 1.35
GSDMD-216ENST00000534602 OSTNP61366 133 aa23.51■■□□□ 1.35
GSDMD-216ENST00000534602 TDGQ13569 410 aa23.51■■□□□ 1.35
GSDMD-216ENST00000534602 CD300LGQ6UXG3 332 aa23.51■■□□□ 1.35
GSDMD-216ENST00000534602 CNTN3Q9P232 1028 aa23.51■■□□□ 1.35
GSDMD-216ENST00000534602 EPS15L1Q9UBC2 864 aa23.51■■□□□ 1.35
GSDMD-216ENST00000534602 MYBP10242 640 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 HOXA9P31269 272 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 RPL9P32969 192 aaKnown RBP23.5■■□□□ 1.35
GSDMD-216ENST00000534602 NUBP1P53384 320 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 NCKAP1LP55160 1127 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 NHLH1Q02575 133 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 RAB33AQ14088 237 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 NOLC1Q14978 699 aaKnown RBP eCLIP23.5■■□□□ 1.35
GSDMD-216ENST00000534602 SF3A1Q15459 793 aaKnown RBP23.5■■□□□ 1.35
GSDMD-216ENST00000534602 RTL10Q7L3V2 364 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 ZMAT2Q96NC0 199 aaKnown RBP23.5■■□□□ 1.35
GSDMD-216ENST00000534602 KCNK12Q9HB15 430 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.5■■□□□ 1.35
GSDMD-216ENST00000534602 MTRRQ9UBK8 725 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 BACE2Q9Y5Z0 518 aa23.5■■□□□ 1.35
GSDMD-216ENST00000534602 VWA8A3KMH1 1905 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 CLDN3O15551 220 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 N4BP1O75113 896 aaKnown RBP23.49■■□□□ 1.35
GSDMD-216ENST00000534602 AVPR2P30518 371 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 ZNF131P52739 623 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 SOX4Q06945 474 aaPredicted RBP23.49■■□□□ 1.35
GSDMD-216ENST00000534602 MCL1Q07820 350 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 LIN9Q5TKA1 542 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 ANKS3Q6ZW76 656 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 NXPE3Q969Y0 559 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 ZBTB45Q96K62 511 aaPredicted RBP23.49■■□□□ 1.35
GSDMD-216ENST00000534602 REEP2Q9BRK0 252 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 GOLGA2P5Q9HBQ8 144 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 BLOC1S4Q9NUP1 217 aa23.49■■□□□ 1.35
GSDMD-216ENST00000534602 KMT2EQ8IZD2 1858 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 NPHP3-ACAD11A0A0J9YXS1 232 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 VPS37CA5D8V6 355 aaPredicted RBP23.48■■□□□ 1.35
GSDMD-216ENST00000534602 POU2F2P09086 479 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 IGFBP6P24592 240 aaPredicted RBP23.48■■□□□ 1.35
GSDMD-216ENST00000534602 GBP2P32456 591 aaPredicted RBP23.48■■□□□ 1.35
GSDMD-216ENST00000534602 PTPN5P54829 565 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 UVSSAQ2YD98 709 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 IER5LQ5T953 404 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 HAUS6Q7Z4H7 955 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 GPBP1Q86WP2 473 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 C3orf58Q8NDZ4 430 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 CCSER1Q9C0I3 900 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 SMOC2Q9H3U7 446 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 PLEKHA5Q9HAU0 1116 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 ANKFY1Q9P2R3 1169 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.48■■□□□ 1.35
GSDMD-216ENST00000534602 CITO14578 2027 aa23.48■■□□□ 1.35
GSDMD-216ENST00000534602 PODXLO00592 558 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 ADAM12O43184 909 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 PLCG1P19174 1290 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 ABCD1P33897 745 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 OR1D2P34982 312 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 VCPP55072 806 aaKnown RBP23.47■■□□□ 1.35
GSDMD-216ENST00000534602 GRIN1Q05586 938 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 SLC10A6Q3KNW5 377 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 PPM1LQ5SGD2 360 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 PRSS33Q8NF86 280 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 RASSF8Q8NHQ8 419 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 RAD54LQ92698 747 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 INTS4Q96HW7 963 aaKnown RBP23.47■■□□□ 1.35
GSDMD-216ENST00000534602 PARVGQ9HBI0 331 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 DUSP12Q9UNI6 340 aa23.47■■□□□ 1.35
GSDMD-216ENST00000534602 ZFP37Q9Y6Q3 630 aaPredicted RBP23.47■■□□□ 1.35
GSDMD-216ENST00000534602 MEFVO15553 781 aaPredicted RBP23.46■■□□□ 1.35
GSDMD-216ENST00000534602 PDGFBP01127 241 aaPredicted RBP23.46■■□□□ 1.35
GSDMD-216ENST00000534602 C8AP07357 584 aa23.46■■□□□ 1.35
GSDMD-216ENST00000534602 HARSP12081 509 aaKnown RBP23.46■■□□□ 1.35
GSDMD-216ENST00000534602 TKTP29401 623 aaKnown RBP23.46■■□□□ 1.35
GSDMD-216ENST00000534602 CACNB1Q02641 598 aaPredicted RBP23.46■■□□□ 1.35
GSDMD-216ENST00000534602 KARSQ15046 597 aaKnown RBP23.46■■□□□ 1.35
GSDMD-216ENST00000534602 KYAT1Q16773 422 aa23.46■■□□□ 1.35
GSDMD-216ENST00000534602 LRRC15Q8TF66 581 aa23.46■■□□□ 1.35
GSDMD-216ENST00000534602 MYADMQ96S97 322 aa23.46■■□□□ 1.35
GSDMD-216ENST00000534602 BACH2Q9BYV9 841 aa23.46■■□□□ 1.35
GSDMD-216ENST00000534602 SYN3O14994 580 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 XYLBO75191 536 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 FAM13AO94988 1023 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 PIGRP01833 764 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 CLTAP09496 248 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 LAMP2P13473 410 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 BRCC3P46736 316 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 MCM6Q14566 821 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 PTPAQ15257 358 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 AXDND1Q5T1B0 1012 aaPredicted RBP23.45■■□□□ 1.34
GSDMD-216ENST00000534602 MYCT1Q8N699 235 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 BICD1Q96G01 975 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 TBX20Q9UMR3 447 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 CDY1Q9Y6F8 540 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 DOCK8Q8NF50 2099 aa23.45■■□□□ 1.34
GSDMD-216ENST00000534602 SYT1P21579 422 aa23.44■■□□□ 1.34
GSDMD-216ENST00000534602 FSHRP23945 695 aa23.44■■□□□ 1.34
GSDMD-216ENST00000534602 DDIT3P35638 169 aa23.44■■□□□ 1.34
GSDMD-216ENST00000534602 DHX8Q14562 1220 aaKnown RBP23.44■■□□□ 1.34
GSDMD-216ENST00000534602 SLC8B1Q6J4K2 584 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms