RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ANKS3Q6ZW76 656 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 CEP120Q8N960 986 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 SNX27Q96L92 541 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 CCSER1Q9C0I3 900 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 PLEKHA5Q9HAU0 1116 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 PIDD1Q9HB75 910 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 CNTN3Q9P232 1028 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 FBXW11Q9UKB1 542 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 BACE2Q9Y5Z0 518 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 MUC6Q6W4X9 2439 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 CLUHO75153 1309 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 ASGR2P07307 311 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 POU2F2P09086 479 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 ZNF131P52739 623 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 OSTNP61366 133 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 MCL1Q07820 350 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 NOLC1Q14978 699 aaKnown RBP eCLIP14.65□□□□□ -0.06
CAPN1-228ENST00000534373 CD300LGQ6UXG3 332 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 HAUS6Q7Z4H7 955 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 GLYCTKQ8IVS8 523 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 FEZF2Q8TBJ5 459 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 TSPAN18Q96SJ8 248 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 BACH2Q9BYV9 841 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 KCNK12Q9HB15 430 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 BLOC1S4Q9NUP1 217 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 EPS15L1Q9UBC2 864 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 MTRRQ9UBK8 725 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 ZFP37Q9Y6Q3 630 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-228ENST00000534373 DENND4AQ7Z401 1863 aa14.65□□□□□ -0.06
CAPN1-228ENST00000534373 PLXNA3P51805 1871 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 VPS37CA5D8V6 355 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-228ENST00000534373 AVPR2P30518 371 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 DDIT3P35638 169 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 SLC10A6Q3KNW5 377 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 LIN9Q5TKA1 542 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 GPBP1Q86WP2 473 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 RAD54LQ92698 747 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 ZBTB45Q96K62 511 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-228ENST00000534373 ZMAT2Q96NC0 199 aaKnown RBP14.64□□□□□ -0.07
CAPN1-228ENST00000534373 REEP2Q9BRK0 252 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 IRF2BPLQ9H1B7 796 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 PARVGQ9HBI0 331 aa14.64□□□□□ -0.07
CAPN1-228ENST00000534373 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-228ENST00000534373 NPHP3-ACAD11A0A0J9YXS1 232 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 PODXLO00592 558 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 SYN3O14994 580 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 N4BP1O75113 896 aaKnown RBP14.63□□□□□ -0.07
CAPN1-228ENST00000534373 FAM13AO94988 1023 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 PIGRP01833 764 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 CLTAP09496 248 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 SYT1P21579 422 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 GBP2P32456 591 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-228ENST00000534373 OR1D2P34982 312 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 PTPN5P54829 565 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 NHLH1Q02575 133 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 SOX4Q06945 474 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-228ENST00000534373 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
CAPN1-228ENST00000534373 PPM1LQ5SGD2 360 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 MYCT1Q8N699 235 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 RASSF8Q8NHQ8 419 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 LARP4BQ92615 738 aaKnown RBP14.63□□□□□ -0.07
CAPN1-228ENST00000534373 GOLGA2P5Q9HBQ8 144 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 ANKFY1Q9P2R3 1169 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 TBX20Q9UMR3 447 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 DUSP12Q9UNI6 340 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 SRPRBQ9Y5M8 271 aaKnown RBP14.63□□□□□ -0.07
CAPN1-228ENST00000534373 C2orf16Q68DN1 1984 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 WDFY4Q6ZS81 3184 aa14.63□□□□□ -0.07
CAPN1-228ENST00000534373 MYH11P35749 1972 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 TRIP11Q15643 1979 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 TRAK2O60296 914 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 XYLBO75191 536 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 KRT18P05783 430 aaKnown RBP14.62□□□□□ -0.07
CAPN1-228ENST00000534373 C8AP07357 584 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 MYBP10242 640 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 LAMP2P13473 410 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 PLCG1P19174 1290 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 CYP3A5P20815 502 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 CLCN5P51795 746 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 GRIN1Q05586 938 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 MCM6Q14566 821 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 PTPAQ15257 358 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 AXDND1Q5T1B0 1012 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-228ENST00000534373 IER5LQ5T953 404 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 SLC8B1Q6J4K2 584 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 C3orf58Q8NDZ4 430 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 ZNF461Q8TAF7 563 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 BICD1Q96G01 975 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 ZSCAN16Q9H4T2 348 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-228ENST00000534373 CCDC39Q9UFE4 941 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 NUB1Q9Y5A7 615 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 CDY1Q9Y6F8 540 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 ZDBF2Q9HCK1 2354 aa14.62□□□□□ -0.07
CAPN1-228ENST00000534373 TTC26A0AVF1 554 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 H7C4K7 107 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 HNRNPDLO14979 420 aaKnown RBP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 ADAM12O43184 909 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 TBC1D4O60343 1298 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 ADRB2P07550 413 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 HARSP12081 509 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms