RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 GRAMD4Q6IC98 578 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 ZFPM1Q8IX07 1006 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 C18orf8Q96DM3 657 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 TARS2Q9BW92 718 aaKnown RBP18.22■□□□□ 0.51
PHRF1-206ENST00000534320 STAP1Q9ULZ2 295 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 BAZ2BQ9UIF8 2168 aaKnown RBP18.22■□□□□ 0.51
PHRF1-206ENST00000534320 A0A087X0T9 212 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 FAM237AA0A1B0GTK4 181 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 FAM228BP0C875 321 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 RWDD4Q6NW29 188 aaKnown RBP18.22■□□□□ 0.51
PHRF1-206ENST00000534320 HOMEZQ8IX15 550 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 SEPT8Q92599 483 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 ZNF560Q96MR9 790 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 TLK1Q9UKI8 766 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 INTUQ9ULD6 942 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 TTC4O95801 387 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 IZUMO3Q5VZ72 239 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 PCNX4Q63HM2 1172 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 LRRC71Q8N4P6 559 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 PHF2O75151 1096 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 TAL1P17542 331 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 BCAR1P56945 870 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 NR1H3Q13133 447 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 THOC5Q13769 683 aaKnown RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 ATL2Q8NHH9 583 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 SCFD2Q8WU76 684 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 YIPF3Q9GZM5 350 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 NAGPAQ9UK23 515 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 TYW5A2RUC4 315 aaKnown RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 ZFXP17010 805 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 PSMC6P62333 389 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 NOP14P78316 857 aaKnown RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 MDM2Q00987 491 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 FAM133BQ5BKY9 247 aaKnown RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 TEX2Q8IWB9 1127 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 SRRM1Q8IYB3 904 aaKnown RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 MED1Q15648 1581 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 RBP5P82980 135 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 SENP7Q9BQF6 1050 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 PI4K2AQ9BTU6 479 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 LTN1O94822 1766 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 EEF1DP29692 281 aaKnown RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 IRX1P78414 480 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 SPARCL1Q14515 664 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 ATF7IP2Q5U623 682 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 GTF3C2Q8WUA4 911 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-206ENST00000534320 LRGUKQ96M69 825 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 TRIM51Q9BSJ1 452 aa18.21■□□□□ 0.51
PHRF1-206ENST00000534320 CDH6P55285 790 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 ASPHQ12797 758 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 ELAC2Q9BQ52 826 aaKnown RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 KLHL8Q9P2G9 620 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 EPS15L1Q9UBC2 864 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 ALG6Q9Y672 507 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 MAN1A2O60476 641 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 TCF7P36402 384 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 TMEM132DQ14C87 1099 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 TMEM119Q4V9L6 283 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 ZNF720Q7Z2F6 126 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 SH3RF1Q7Z6J0 888 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 USP38Q8NB14 1042 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 SYTL5Q8TDW5 730 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 NRBF2Q96F24 287 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 GOLPH3Q9H4A6 298 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 HBP1O60381 514 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 COMTP21964 271 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 NBPF12Q5TAG4 269 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 MMGT1Q8N4V1 131 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 TMEM117Q9H0C3 514 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 ERAP1Q9NZ08 941 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 PIN4Q9Y237 131 aaKnown RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 DYNC1LI2O43237 492 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 TOM1L1O75674 476 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 LMNAP02545 664 aaKnown RBP18.2■□□□□ 0.5
PHRF1-206ENST00000534320 TSPY1Q01534 308 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 KLHL38Q2WGJ6 581 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 RCOR2Q8IZ40 523 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 CYP2W1Q8TAV3 490 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 BAG5Q9UL15 447 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 DLG5Q8TDM6 1919 aa18.2■□□□□ 0.5
PHRF1-206ENST00000534320 FAM86B1E9PN63 330 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 FAM86B2P0C5J1 330 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 ROR1Q01973 937 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 DEUP1Q05D60 604 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 RCN2Q14257 317 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 EFCAB12Q6NXP0 572 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 CEP70Q8NHQ1 597 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 EFHD1Q9BUP0 239 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 WDR35Q9P2L0 1181 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 DUSP10Q9Y6W6 482 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PI4K2BG5E9Z4 385 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PDIA2Q13087 525 aaKnown RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 EPM2AIP1Q7L775 607 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 TRAPPC11Q7Z392 1133 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 NUDT12Q9BQG2 462 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PITPNM3Q9BZ71 974 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 GOLGA8QA0A0J9YX86 632 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 GOLGA8OA6NCC3 632 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms