RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
CAPN5-207ENST00000533889 DHX8Q14562 1220 aaKnown RBP19.21■□□□□ 0.67
CAPN5-207ENST00000533889 TMEM119Q4V9L6 283 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 PPM1LQ5SGD2 360 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 ALKAL1Q6UXT8 129 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 BRAPQ7Z569 592 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 TMEM161BQ8NDZ6 487 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 RASSF8Q8NHQ8 419 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 DDX27Q96GQ7 796 aaKnown RBP19.21■□□□□ 0.67
CAPN5-207ENST00000533889 MYADMQ96S97 322 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 LARSQ9P2J5 1176 aaKnown RBP19.21■□□□□ 0.67
CAPN5-207ENST00000533889 FBXW11Q9UKB1 542 aa19.21■□□□□ 0.67
CAPN5-207ENST00000533889 VPS37CA5D8V6 355 aaPredicted RBP19.2■□□□□ 0.66
CAPN5-207ENST00000533889 ADAM12O43184 909 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 SLC26A4O43511 780 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 TOM1L1O75674 476 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 PAPLNO95428 1278 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 C8AP07357 584 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 MAPTP10636 758 aaKnown RBP19.2■□□□□ 0.66
CAPN5-207ENST00000533889 MRE11P49959 708 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 SOX4Q06945 474 aaPredicted RBP19.2■□□□□ 0.66
CAPN5-207ENST00000533889 XKR4Q5GH76 650 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 GET4Q7L5D6 327 aaPredicted RBP19.2■□□□□ 0.66
CAPN5-207ENST00000533889 RSAD2Q8WXG1 361 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 SNX27Q96L92 541 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 ZMAT2Q96NC0 199 aaKnown RBP19.2■□□□□ 0.66
CAPN5-207ENST00000533889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.2■□□□□ 0.66
CAPN5-207ENST00000533889 EPS15L1Q9UBC2 864 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 FBXL21Q9UKT6 434 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 POLIQ9UNA4 740 aa19.2■□□□□ 0.66
CAPN5-207ENST00000533889 MYH11P35749 1972 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 H0YCG3 227 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 PODXLO00592 558 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 ABLIM1O14639 778 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 CLDN3O15551 220 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 KRT18P05783 430 aaKnown RBP19.19■□□□□ 0.66
CAPN5-207ENST00000533889 HNRNPA1P09651 372 aaKnown RBP eCLIP19.19■□□□□ 0.66
CAPN5-207ENST00000533889 KCNE1P15382 129 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 TKTP29401 623 aaKnown RBP19.19■□□□□ 0.66
CAPN5-207ENST00000533889 BRCC3P46736 316 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 RAB33AQ14088 237 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
CAPN5-207ENST00000533889 SF3A1Q15459 793 aaKnown RBP19.19■□□□□ 0.66
CAPN5-207ENST00000533889 SEZ6Q53EL9 994 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 ARSHQ5FYA8 562 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 CD300LGQ6UXG3 332 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 ZPBP2Q6X784 338 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 ANKS3Q6ZW76 656 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 GRASPQ7Z6J2 395 aaPredicted RBP19.19■□□□□ 0.66
CAPN5-207ENST00000533889 GPBP1Q86WP2 473 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 C3orf58Q8NDZ4 430 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 BICD1Q96G01 975 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 MTRRQ9UBK8 725 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 DUSP12Q9UNI6 340 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 CDY1Q9Y6F8 540 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 KMT2EQ8IZD2 1858 aa19.19■□□□□ 0.66
CAPN5-207ENST00000533889 CCL16O15467 120 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 XYLBO75191 536 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 LAMP2P13473 410 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 PDCP20941 246 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 FSHRP23945 695 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 LONP1P36776 959 aaKnown RBP19.18■□□□□ 0.66
CAPN5-207ENST00000533889 TCF15Q12870 199 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 AXDND1Q5T1B0 1012 aaPredicted RBP19.18■□□□□ 0.66
CAPN5-207ENST00000533889 ASTLQ6HA08 431 aaPredicted RBP19.18■□□□□ 0.66
CAPN5-207ENST00000533889 HAUS6Q7Z4H7 955 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 MYCT1Q8N699 235 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 FLCNQ8NFG4 579 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 SLC7A14Q8TBB6 771 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 C18orf25Q96B23 403 aaPredicted RBP19.18■□□□□ 0.66
CAPN5-207ENST00000533889 CNTN3Q9P232 1028 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 ODF2LQ9ULJ1 636 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 NUB1Q9Y5A7 615 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 BACE2Q9Y5Z0 518 aa19.18■□□□□ 0.66
CAPN5-207ENST00000533889 VWA8A3KMH1 1905 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 FAM13AO94988 1023 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 RPL9P32969 192 aaKnown RBP19.17■□□□□ 0.66
CAPN5-207ENST00000533889 NUBP1P53384 320 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 CUL4AQ13619 759 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 KARSQ15046 597 aaKnown RBP19.17■□□□□ 0.66
CAPN5-207ENST00000533889 SLC10A6Q3KNW5 377 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 RSPO2Q6UXX9 243 aaPredicted RBP19.17■□□□□ 0.66
CAPN5-207ENST00000533889 SLC44A3Q8N4M1 653 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 TMEM105Q8N8V8 129 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 NXPE3Q969Y0 559 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 REEP2Q9BRK0 252 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 IRF2BPLQ9H1B7 796 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 ZHX3Q9H4I2 956 aa19.17■□□□□ 0.66
CAPN5-207ENST00000533889 PIEZO1Q92508 2521 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 NARSO43776 548 aaKnown RBP19.16■□□□□ 0.66
CAPN5-207ENST00000533889 PLCG1P19174 1290 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 LIG4P49917 911 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 CLCN5P51795 746 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 NCKAP1LP55160 1127 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 NTHL1P78549 312 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 GRIN1Q05586 938 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 MCL1Q07820 350 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 MCM6Q14566 821 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 UVSSAQ2YD98 709 aa19.16■□□□□ 0.66
CAPN5-207ENST00000533889 SIX5Q8N196 739 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms