RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 KRT31Q15323 416 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 NAB2Q15742 525 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 GLRA4Q5JXX5 417 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 APTXQ7Z2E3 356 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 WDR49Q8IV35 697 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 TMEM130Q8N3G9 435 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 OR5B17Q8NGF7 314 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 PHOSPHO2Q8TCD6 241 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 C18orf25Q96B23 403 aaPredicted RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 RNPC3Q96LT9 517 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 PPP1R10Q96QC0 940 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 FNBP1Q96RU3 617 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 RPS6KC1Q96S38 1066 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 TSPAN18Q96SJ8 248 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 LIMA1Q9UHB6 759 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 DERAQ9Y315 318 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 C2CD2Q9Y426 696 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 LRRC10BA6NIK2 292 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TBKBP1A7MCY6 615 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 GJB5O95377 273 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 THP07101 528 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TNNI1P19237 187 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TPM4P67936 248 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
COMMD9-208ENST00000533643 PPP3CAQ08209 521 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 DCAF17Q5H9S7 520 aaPredicted RBP12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TCERG1LQ5VWI1 586 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 USP37Q86T82 979 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 NT5DC4Q86YG4 428 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 HERC6Q8IVU3 1022 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 ABI1Q8IZP0 508 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 URGCPQ8TCY9 931 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 TAB2Q9NYJ8 693 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 KANSL3Q9P2N6 904 aa12.9□□□□□ -0.34
COMMD9-208ENST00000533643 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.9□□□□□ -0.34
COMMD9-208ENST00000533643 B4GALT3O60512 393 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
COMMD9-208ENST00000533643 GTF2H1P32780 548 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 GCLMP48507 274 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 GUCY2FP51841 1108 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 COPB1P53618 953 aaKnown RBP12.89□□□□□ -0.35
COMMD9-208ENST00000533643 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
COMMD9-208ENST00000533643 SOX4Q06945 474 aaPredicted RBP12.89□□□□□ -0.35
COMMD9-208ENST00000533643 KCNH2Q12809 1159 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 GRIK3Q13003 919 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 MAN2A1Q16706 1144 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 PAN2Q504Q3 1202 aaKnown RBP12.89□□□□□ -0.35
COMMD9-208ENST00000533643 MIIPQ5JXC2 388 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 ZNF280BQ86YH2 543 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
COMMD9-208ENST00000533643 RSPH1Q8WYR4 309 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 MTMR12Q9C0I1 747 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
COMMD9-208ENST00000533643 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
COMMD9-208ENST00000533643 STX10O60499 249 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 DDHD2O94830 711 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 TNNC2P02585 160 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 AFPP02771 609 aaKnown RBP12.88□□□□□ -0.35
COMMD9-208ENST00000533643 PRKCSHP14314 528 aaPredicted RBP12.88□□□□□ -0.35
COMMD9-208ENST00000533643 CYP3A5P20815 502 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 AP3M2P53677 418 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 DSC1Q08554 894 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 CBWD6Q4V339 395 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 VWA3BQ502W6 1294 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 CBWD3Q5JTY5 395 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 CBWD5Q5RIA9 395 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
COMMD9-208ENST00000533643 FAM109BQ6ICB4 259 aaPredicted RBP12.88□□□□□ -0.35
COMMD9-208ENST00000533643 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 TRAPPC11Q7Z392 1133 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 CMTR2Q8IYT2 770 aaKnown RBP12.88□□□□□ -0.35
COMMD9-208ENST00000533643 C1orf127Q8N9H9 656 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 BEST2Q8NFU1 509 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 CXorf38Q8TB03 319 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 RAD9AQ99638 391 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 MRPL9Q9BYD2 267 aaKnown RBP12.88□□□□□ -0.35
COMMD9-208ENST00000533643 VPS16Q9H269 839 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 NDST4Q9H3R1 872 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms