RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 TRAF3IP3Q9Y228 551 aa18.75■□□□□ 0.59
CTSB-229ENST00000533572 FAM50BQ9Y247 325 aa18.75■□□□□ 0.59
CTSB-229ENST00000533572 USP20Q9Y2K6 914 aa18.75■□□□□ 0.59
CTSB-229ENST00000533572 PCDHGC5Q9Y5F6 944 aa18.75■□□□□ 0.59
CTSB-229ENST00000533572 TTLL13PA6NNM8 815 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
CTSB-229ENST00000533572 FSCN2O14926 492 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 INPPL1O15357 1258 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 DDHD2O94830 711 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 SRGAP2BP0DMP2 458 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 BMP6P22004 513 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 PROZP22891 400 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 RPL13P26373 211 aaKnown RBP18.74■□□□□ 0.59
CTSB-229ENST00000533572 MATR3P43243 847 aaKnown RBP eCLIP18.74■□□□□ 0.59
CTSB-229ENST00000533572 OR1G1P47890 313 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 AFF1P51825 1210 aaKnown RBP18.74■□□□□ 0.59
CTSB-229ENST00000533572 POU5F1Q01860 360 aaKnown RBP18.74■□□□□ 0.59
CTSB-229ENST00000533572 MCL1Q07820 350 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 KCNA1Q09470 495 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 GRIK3Q13003 919 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 NFIL3Q16649 462 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 PUS10Q3MIT2 529 aaKnown RBP18.74■□□□□ 0.59
CTSB-229ENST00000533572 ZSCAN23Q3MJ62 389 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 ZNF568Q3ZCX4 644 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 EEF1DP3Q658K8 133 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 CENPPQ6IPU0 288 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 EFHBQ8N7U6 833 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 GLIS3Q8NEA6 775 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 UHRF1Q96T88 793 aaPredicted RBP18.74■□□□□ 0.59
CTSB-229ENST00000533572 NAT10Q9H0A0 1025 aaKnown RBP18.74■□□□□ 0.59
CTSB-229ENST00000533572 PTPRHQ9HD43 1115 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 SNTG2Q9NY99 539 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 KLK14Q9P0G3 267 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 REV3LO60673 3130 aa18.74■□□□□ 0.59
CTSB-229ENST00000533572 CAVIN2O95810 425 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 CCNE1P24864 410 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 ERCC5P28715 1186 aaPredicted RBP18.73■□□□□ 0.59
CTSB-229ENST00000533572 GTF2F1P35269 517 aaKnown RBP eCLIP18.73■□□□□ 0.59
CTSB-229ENST00000533572 PAK1Q13153 545 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.599e-21■■■□□ 15.7
CTSB-229ENST00000533572 COL19A1Q14993 1142 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 EDRF1Q3B7T1 1238 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 ARMCX5Q6P1M9 558 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 DDX53Q86TM3 631 aaKnown RBP18.73■□□□□ 0.59
CTSB-229ENST00000533572 SMYD4Q8IYR2 804 aaPredicted RBP18.73■□□□□ 0.59
CTSB-229ENST00000533572 VPS52Q8N1B4 723 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 POMGNT1Q8WZA1 660 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 KCTD10Q9H3F6 313 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 KIAA1586Q9HCI6 787 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 MAPK8IP1Q9UQF2 711 aa18.73■□□□□ 0.59
CTSB-229ENST00000533572 PRG3Q9Y2Y8 225 aaPredicted RBP18.73■□□□□ 0.59
CTSB-229ENST00000533572 MUC3AQ02505 3323 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 PPP1R3GB7ZBB8 358 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 NRP1O14786 923 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 PER2O15055 1255 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 TGFB1I1O43294 461 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 RECQL4O94761 1208 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 EDN1P05305 212 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 BMP1P13497 986 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 HOXD13P35453 343 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 YARSP54577 528 aaKnown RBP18.72■□□□□ 0.59
CTSB-229ENST00000533572 TYRO3Q06418 890 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 CTC1Q2NKJ3 1217 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 PTCRAQ6ISU1 281 aaPredicted RBP18.72■□□□□ 0.59
CTSB-229ENST00000533572 TMEM173Q86WV6 379 aaPredicted RBP18.72■□□□□ 0.59
CTSB-229ENST00000533572 SLC9A9Q8IVB4 645 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 COLGALT2Q8IYK4 626 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
CTSB-229ENST00000533572 AGPAT3Q9NRZ7 376 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 ANKFY1Q9P2R3 1169 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 RWDD2AQ9UIY3 292 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 NCOR1O75376 2440 aa18.72■□□□□ 0.59
CTSB-229ENST00000533572 TDRD15B5MCY1 1934 aaKnown RBP18.71■□□□□ 0.59
CTSB-229ENST00000533572 A0A0B4J269 797 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.71■□□□□ 0.59
CTSB-229ENST00000533572 SYCE3A1L190 88 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 OGTO15294 1046 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 LINC01565O15544 149 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 B4GALT3O60512 393 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 FGFR1OPO95684 399 aaKnown RBP18.71■□□□□ 0.59
CTSB-229ENST00000533572 CXCL14O95715 111 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 ADAM15Q13444 863 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 DUSP6Q16828 381 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 DPCR1Q3MIW9 517 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 MSTO1Q9BUK6 570 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 COLEC11Q9BWP8 271 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 CDT1Q9H211 546 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 TOPORSQ9NS56 1045 aaPredicted RBP18.71■□□□□ 0.59
CTSB-229ENST00000533572 MIOSQ9NXC5 875 aa18.71■□□□□ 0.59
CTSB-229ENST00000533572 AGO2Q9UKV8 859 aaKnown RBP18.71■□□□□ 0.59
CTSB-229ENST00000533572 TCF20Q9UGU0 1960 aaKnown RBP18.71■□□□□ 0.59
CTSB-229ENST00000533572 HIDE1A8MVS5 230 aa18.7■□□□□ 0.58
CTSB-229ENST00000533572 ANKRD63C9JTQ0 380 aa18.7■□□□□ 0.58
CTSB-229ENST00000533572 ABLIM1O14639 778 aa18.7■□□□□ 0.58
CTSB-229ENST00000533572 THP07101 528 aa18.7■□□□□ 0.58
CTSB-229ENST00000533572 CTSAP10619 480 aa18.7■□□□□ 0.58
CTSB-229ENST00000533572 HARSP12081 509 aaKnown RBP18.7■□□□□ 0.58
CTSB-229ENST00000533572 FKBP3Q00688 224 aaKnown RBP18.7■□□□□ 0.58
CTSB-229ENST00000533572 DSC1Q08554 894 aa18.7■□□□□ 0.58
CTSB-229ENST00000533572 CLUL1Q15846 466 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms