RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 LRPAP1P30533 357 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 ME1P48163 572 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 GLUD2P49448 558 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 NDUFV1P49821 464 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 CLCN4P51793 760 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 SNRPFP62306 86 aaKnown RBP10.74□□□□□ -0.69
NUP98-220ENST00000533346 CREMQ03060 361 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 ITIH3Q06033 890 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
NUP98-220ENST00000533346 PDXDC1Q6P996 788 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 SYCE2Q6PIF2 218 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 CYP26C1Q6V0L0 522 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 TAS1R1Q7RTX1 841 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 RBM23Q86U06 439 aaKnown RBP10.74□□□□□ -0.69
NUP98-220ENST00000533346 SFR1Q86XK3 245 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 PDILTQ8N807 584 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 TMEM174Q8WUU8 243 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 PIK3R5Q8WYR1 880 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 UHRF1Q96T88 793 aaPredicted RBP10.74□□□□□ -0.69
NUP98-220ENST00000533346 PAAF1Q9BRP4 392 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 PANK2Q9BZ23 570 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 IGFLR1Q9H665 355 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 ASB7Q9H672 318 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 TMEM206Q9H813 350 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 PANK4Q9NVE7 773 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 DZANK1Q9NVP4 752 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 DPP7Q9UHL4 492 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 KCNH3Q9ULD8 1083 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 EXOC7Q9UPT5 735 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 PRG3Q9Y2Y8 225 aaPredicted RBP10.74□□□□□ -0.69
NUP98-220ENST00000533346 DERAQ9Y315 318 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 SF3B1O75533 1304 aaKnown RBP eCLIP10.74□□□□□ -0.69
NUP98-220ENST00000533346 DENND4AQ7Z401 1863 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 H3BQ06 376 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 EIF3DO15371 548 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP98-220ENST00000533346 POLR2DO15514 142 aaKnown RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 KIF4AO95239 1232 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 LDHAP00338 332 aaKnown RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 URODP06132 367 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 CNPP09543 421 aaKnown RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 SLFN14P0C7P3 912 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 IL9P15248 144 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 GARTP22102 1010 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 FGFR3P22607 806 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 ADSSP30520 456 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 CLCNKBP51801 687 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 SOX4Q06945 474 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 CBX2Q14781 532 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 ZC2HC1CQ53FD0 456 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 HERC4Q5GLZ8 1057 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 UNC13DQ70J99 1090 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 RTL10Q7L3V2 364 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 EPM2AIP1Q7L775 607 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 ZBTB33Q86T24 672 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 NT5DC4Q86YG4 428 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 ADHFE1Q8IWW8 467 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 LNX1Q8TBB1 728 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 ZNF507Q8TCN5 953 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 FOXD4L4Q8WXT5 416 aaPredicted RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 DHX58Q96C10 678 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 SPATA32Q96LK8 384 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 ACCSQ96QU6 501 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 ADAM7Q9H2U9 754 aa10.73□□□□□ -0.69
NUP98-220ENST00000533346 MRPL44Q9H9J2 332 aaKnown RBP10.73□□□□□ -0.69
NUP98-220ENST00000533346 CASTOR2A6NHX0 329 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 ANKRD63C9JTQ0 380 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 F8W810 466 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 SYN3O14994 580 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 XPOTO43592 962 aaKnown RBP10.72□□□□□ -0.69
NUP98-220ENST00000533346 TRAPPC3O43617 180 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 ADH1AP07327 375 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 ZP2Q05996 745 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 MRPL58Q14197 206 aaKnown RBP10.72□□□□□ -0.69
NUP98-220ENST00000533346 ENOX2Q16206 610 aaKnown RBP10.72□□□□□ -0.69
NUP98-220ENST00000533346 BMT2Q1RMZ1 405 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 CRELD2Q6UXH1 353 aaPredicted RBP10.72□□□□□ -0.69
NUP98-220ENST00000533346 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 STXBP4Q6ZWJ1 553 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 BICD1Q96G01 975 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 NECTIN4Q96NY8 510 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 POP1Q99575 1024 aaKnown RBP10.72□□□□□ -0.69
NUP98-220ENST00000533346 ZHX3Q9H4I2 956 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 PLEKHA4Q9H4M7 779 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 ANKFY1Q9P2R3 1169 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 BARX2Q9UMQ3 279 aaPredicted RBP10.72□□□□□ -0.69
NUP98-220ENST00000533346 UBQLN1Q9UMX0 589 aaKnown RBP10.72□□□□□ -0.69
NUP98-220ENST00000533346 C2CD2Q9Y426 696 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 BACE2Q9Y5Z0 518 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 UBE4BO95155 1302 aa10.72□□□□□ -0.69
NUP98-220ENST00000533346 TEX28O15482 410 aa10.71□□□□□ -0.69
NUP98-220ENST00000533346 ACTN4O43707 911 aaKnown RBP10.71□□□□□ -0.69
NUP98-220ENST00000533346 TBC1D4O60343 1298 aa10.71□□□□□ -0.69
NUP98-220ENST00000533346 B3GAT3O94766 335 aa10.71□□□□□ -0.69
NUP98-220ENST00000533346 GCNT3O95395 438 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms