RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 KLHL5Q96PQ7 755 aa15.77■□□□□ 0.12
PUF60-220ENST00000532884 ACCSQ96QU6 501 aa15.77■□□□□ 0.12
PUF60-220ENST00000532884 SCAND2PQ9GZW5 306 aaPredicted RBP15.77■□□□□ 0.12
PUF60-220ENST00000532884 ST6GALNAC4Q9H4F1 302 aa15.77■□□□□ 0.12
PUF60-220ENST00000532884 RPF1Q9H9Y2 349 aaKnown RBP15.77■□□□□ 0.12
PUF60-220ENST00000532884 SLC38A7Q9NVC3 462 aa15.77■□□□□ 0.12
PUF60-220ENST00000532884 FAM50BQ9Y247 325 aa15.77■□□□□ 0.12
PUF60-220ENST00000532884 PCDHB13Q9Y5F0 798 aa15.77■□□□□ 0.12
PUF60-220ENST00000532884 TDRD15B5MCY1 1934 aaKnown RBP15.76■□□□□ 0.11
PUF60-220ENST00000532884 SF3B1O75533 1304 aaKnown RBP eCLIP15.76■□□□□ 0.11
PUF60-220ENST00000532884 FSD2A1L4K1 749 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 LACTBL1A8MY62 500 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 I3L4J1 428 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 MBTPS2O43462 519 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 PRPF6O94906 941 aaKnown RBP15.76■□□□□ 0.11
PUF60-220ENST00000532884 KCNE1P15382 129 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 EPCAMP16422 314 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 NUCB2P80303 420 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 ENOX2Q16206 610 aaKnown RBP15.76■□□□□ 0.11
PUF60-220ENST00000532884 XKR4Q5GH76 650 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 KIAA0319Q5VV43 1072 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 SLFN12LQ6IEE8 588 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 ANKRD54Q6NXT1 300 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 DCLRE1AQ6PJP8 1040 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 TMEM130Q8N3G9 435 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 GLIS3Q8NEA6 775 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 NOC3LQ8WTT2 800 aaKnown RBP15.76■□□□□ 0.11
PUF60-220ENST00000532884 KCNN1Q92952 543 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 C7orf25Q9BPX7 421 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 OLFML3Q9NRN5 406 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 CNTN3Q9P232 1028 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 AGO2Q9UKV8 859 aaKnown RBP15.76■□□□□ 0.11
PUF60-220ENST00000532884 EXOC7Q9UPT5 735 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 SSX2IPQ9Y2D8 614 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 IRAK3Q9Y616 596 aa15.76■□□□□ 0.11
PUF60-220ENST00000532884 FRMD3A2A2Y4 597 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 TEX28O15482 410 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 LILRB3O75022 631 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 PPP1R37O75864 691 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 EFEMP2O95967 443 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 RPL17P18621 184 aaKnown RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 DSG1Q02413 1049 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 PPP2R3AQ06190 1150 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 SMAD4Q13485 552 aaKnown RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 CUL4BQ13620 913 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 KCNC3Q14003 757 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 KYAT1Q16773 422 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 UPP1Q16831 310 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 L1TD1Q5T7N2 865 aaKnown RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 KANK3Q6NY19 840 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 PRSS55Q6UWB4 352 aaPredicted RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 PALB2Q86YC2 1186 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 RNF168Q8IYW5 571 aaPredicted RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 C12orf76Q8N812 135 aaPredicted RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 CASP10Q92851 521 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 HVCN1Q96D96 273 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 KIF12Q96FN5 646 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 UROC1Q96N76 676 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 PYM1Q9BRP8 204 aaKnown RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 STRA6Q9BX79 667 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 MAGEF1Q9HAY2 307 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 CHST7Q9NS84 486 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 USP15Q9Y4E8 981 aaPredicted RBP15.75■□□□□ 0.11
PUF60-220ENST00000532884 BDP1A6H8Y1 2624 aa15.75■□□□□ 0.11
PUF60-220ENST00000532884 TTC26A0AVF1 554 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 PODXLO00592 558 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 FAM189A1O60320 539 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 SLFN14P0C7P3 912 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 SPATA31D3P0C874 917 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 SSTR3P32745 418 aaPredicted RBP15.74■□□□□ 0.11
PUF60-220ENST00000532884 SYKP43405 635 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 BRCC3P46736 316 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 NDUFA8P51970 172 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 RTP2Q5QGT7 225 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 SYCE2Q6PIF2 218 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 TMEM184AQ6ZMB5 413 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 SPATA31D4Q6ZUB0 917 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 FSIP1Q8NA03 581 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 SMRP1Q8NCR6 262 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 SLC22A17Q8WUG5 538 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 DDX27Q96GQ7 796 aaKnown RBP15.74■□□□□ 0.11
PUF60-220ENST00000532884 PAGE5Q96GU1 130 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 TTPALQ9BTX7 342 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 PLEKHA5Q9HAU0 1116 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 TUBGCP4Q9UGJ1 667 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 NUB1Q9Y5A7 615 aa15.74■□□□□ 0.11
PUF60-220ENST00000532884 TNFRSF10AO00220 468 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 ACTN4O43707 911 aaKnown RBP15.73■□□□□ 0.11
PUF60-220ENST00000532884 ADH1AP07327 375 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 WEE2P0C1S8 567 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 ADSSP30520 456 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 CLCN4P51793 760 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 GUCY2FP51841 1108 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 ALCAMQ13740 583 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 POSTNQ15063 836 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 SMAD2Q15796 467 aaKnown RBP15.73■□□□□ 0.11
PUF60-220ENST00000532884 FAM26FQ5R3K3 315 aa15.73■□□□□ 0.11
PUF60-220ENST00000532884 RARS2Q5T160 578 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms