RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PAPLNO95428 1278 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 NMT1P30419 496 aaKnown RBP19.49■□□□□ 0.71
SMG1-203ENST00000532700 NOLC1Q14978 699 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMG1-203ENST00000532700 CMASQ8NFW8 434 aaPredicted RBP19.49■□□□□ 0.71
SMG1-203ENST00000532700 SNX21Q969T3 373 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 CALML4Q96GE6 196 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 DDX27Q96GQ7 796 aaKnown RBP19.49■□□□□ 0.71
SMG1-203ENST00000532700 TCHPQ9BT92 498 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 CCDC94Q9BW85 323 aaPredicted RBP19.49■□□□□ 0.71
SMG1-203ENST00000532700 KCND2Q9NZV8 630 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 CNTN3Q9P232 1028 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 FBXW11Q9UKB1 542 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 SSX2IPQ9Y2D8 614 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 HCN4Q9Y3Q4 1203 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 TSC2P49815 1807 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 TOM1L1O75674 476 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 BMP15O95972 392 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 CXCL8P10145 99 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 KCNE1P15382 129 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 VCPP55072 806 aaKnown RBP19.48■□□□□ 0.71
SMG1-203ENST00000532700 MCL1Q07820 350 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 SIGLEC14Q08ET2 396 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 ZC2HC1CQ53FD0 456 aaPredicted RBP19.48■□□□□ 0.71
SMG1-203ENST00000532700 IER5LQ5T953 404 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 C15orf39Q6ZRI6 1047 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 CCDC149Q6ZUS6 474 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 ZDHHC14Q8IZN3 488 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 KCTD17Q8N5Z5 321 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 SMG7Q92540 1137 aaKnown RBP19.48■□□□□ 0.71
SMG1-203ENST00000532700 LARP4BQ92615 738 aaKnown RBP19.48■□□□□ 0.71
SMG1-203ENST00000532700 INTS4Q96HW7 963 aaKnown RBP19.48■□□□□ 0.71
SMG1-203ENST00000532700 ACAP3Q96P50 834 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 MYADMQ96S97 322 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 CCSER1Q9C0I3 900 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMG1-203ENST00000532700 ODF2LQ9ULJ1 636 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 COL4A3Q01955 1670 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 CLUHO75153 1309 aa19.48■□□□□ 0.71
SMG1-203ENST00000532700 K7ENM7 598 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 SLC26A4O43511 780 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 PDCP20941 246 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 GUCY2FP51841 1108 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 YARSP54577 528 aaKnown RBP19.47■□□□□ 0.71
SMG1-203ENST00000532700 NTHL1P78549 312 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 STRN3Q13033 797 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 DCLRE1AQ6PJP8 1040 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 ZPBP2Q6X784 338 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.47■□□□□ 0.71
SMG1-203ENST00000532700 GPR65Q8IYL9 337 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 MYCT1Q8N699 235 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 RSAD2Q8WXG1 361 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 PBXIP1Q96AQ6 731 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 WDR6Q9NNW5 1121 aaKnown RBP19.47■□□□□ 0.71
SMG1-203ENST00000532700 TBX20Q9UMR3 447 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 SORCS3Q9UPU3 1222 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 USTQ9Y2C2 406 aa19.47■□□□□ 0.71
SMG1-203ENST00000532700 SRPRBQ9Y5M8 271 aaKnown RBP19.47■□□□□ 0.71
SMG1-203ENST00000532700 ANKRD63C9JTQ0 380 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 PODXLO00592 558 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 FAM13AO94988 1023 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 SMTNP53814 917 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 DYMQ7RTS9 669 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 BMP8AQ7Z5Y6 402 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 HSCBQ8IWL3 235 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 FGFBP2Q9BYJ0 223 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 ZHX3Q9H4I2 956 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 TOPORSQ9NS56 1045 aaPredicted RBP19.46■□□□□ 0.71
SMG1-203ENST00000532700 MTRRQ9UBK8 725 aa19.46■□□□□ 0.71
SMG1-203ENST00000532700 MUC6Q6W4X9 2439 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 MYMKA6NI61 221 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 PPEF2O14830 753 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 STX6O43752 255 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 ZMYND10O75800 440 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 OR1D2P34982 312 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 FOXD4L5Q5VV16 416 aaPredicted RBP19.45■□□□□ 0.7
SMG1-203ENST00000532700 SFR1Q86XK3 245 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 PRSS33Q8NF86 280 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 RASSF8Q8NHQ8 419 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 FOXD4L4Q8WXT5 416 aaPredicted RBP19.45■□□□□ 0.7
SMG1-203ENST00000532700 KCNN1Q92952 543 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 PANK2Q9BZ23 570 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 PARVGQ9HBI0 331 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 LARSQ9P2J5 1176 aaKnown RBP19.45■□□□□ 0.7
SMG1-203ENST00000532700 CDY1Q9Y6F8 540 aa19.45■□□□□ 0.7
SMG1-203ENST00000532700 TTC26A0AVF1 554 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 CLDN3O15551 220 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 NARSO43776 548 aaKnown RBP19.44■□□□□ 0.7
SMG1-203ENST00000532700 TRAK2O60296 914 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 PIGRP01833 764 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 DDIT3P35638 169 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 KCNA1Q09470 495 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 ENOX2Q16206 610 aaKnown RBP19.44■□□□□ 0.7
SMG1-203ENST00000532700 POTEHQ6S545 545 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 APBB1IPQ7Z5R6 666 aaPredicted RBP19.44■□□□□ 0.7
SMG1-203ENST00000532700 HDAC7Q8WUI4 952 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 DNAJC19Q96DA6 116 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 FAM122AQ96E09 287 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 BICD1Q96G01 975 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 UROC1Q96N76 676 aa19.44■□□□□ 0.7
SMG1-203ENST00000532700 PRKD2Q9BZL6 878 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms