RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 TDRD15B5MCY1 1934 aaKnown RBP15.77■□□□□ 0.12
FOXR1-202ENST00000531539 GRXCR2A6NFK2 248 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 LILRB3O75022 631 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 PPP1R37O75864 691 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 B3GAT3O94766 335 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 KIF4AO95239 1232 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 GLP2RO95838 553 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 EFEMP2O95967 443 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 URODP06132 367 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 GLUD2P49448 558 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 ACOT2P49753 483 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 SOX4Q06945 474 aaPredicted RBP15.77■□□□□ 0.12
FOXR1-202ENST00000531539 CUL4BQ13620 913 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 POSTNQ15063 836 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 POMGNT1Q8WZA1 660 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 DDX27Q96GQ7 796 aaKnown RBP15.77■□□□□ 0.12
FOXR1-202ENST00000531539 PAGE5Q96GU1 130 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 UROC1Q96N76 676 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 NECAB3Q96P71 396 aaPredicted RBP15.77■□□□□ 0.12
FOXR1-202ENST00000531539 APOL5Q9BWW9 433 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 PLEKHA5Q9HAU0 1116 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 CNTN3Q9P232 1028 aa15.77■□□□□ 0.12
FOXR1-202ENST00000531539 AGO2Q9UKV8 859 aaKnown RBP15.77■□□□□ 0.12
FOXR1-202ENST00000531539 A0A0C4DFX4 3053 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 FSD2A1L4K1 749 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 CNPP09543 421 aaKnown RBP15.76■□□□□ 0.11
FOXR1-202ENST00000531539 SRGAP2BP0DMP2 458 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 IL9P15248 144 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 SYKP43405 635 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 NDUFA8P51970 172 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 DSG1Q02413 1049 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 ALCAMQ13740 583 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 UPP1Q16831 310 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 FAM171A1Q5VUB5 890 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 ANKRD54Q6NXT1 300 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 CNNM4Q6P4Q7 775 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 TMEM184AQ6ZMB5 413 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 STXBP4Q6ZWJ1 553 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 UNC13DQ70J99 1090 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 FSIP1Q8NA03 581 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 GLIS3Q8NEA6 775 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 RIN2Q8WYP3 895 aaPredicted RBP15.76■□□□□ 0.11
FOXR1-202ENST00000531539 KIF12Q96FN5 646 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 MSLNLQ96KJ4 702 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 UHRF1Q96T88 793 aaPredicted RBP15.76■□□□□ 0.11
FOXR1-202ENST00000531539 CHST7Q9NS84 486 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 CPSF3Q9UKF6 684 aaKnown RBP15.76■□□□□ 0.11
FOXR1-202ENST00000531539 FAM50BQ9Y247 325 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 HPSEQ9Y251 543 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 STYXL1Q9Y6J8 313 aa15.76■□□□□ 0.11
FOXR1-202ENST00000531539 TCF20Q9UGU0 1960 aaKnown RBP15.76■□□□□ 0.11
FOXR1-202ENST00000531539 SF3B1O75533 1304 aaKnown RBP eCLIP15.75■□□□□ 0.11
FOXR1-202ENST00000531539 ATG2AQ2TAZ0 1938 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 PVALEFA0A1B0GWK0 134 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 A0A1W2PQ27 194 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 A0A1W2PQ64 194 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 A0A1W2PQD8 194 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 TTC26A0AVF1 554 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 GOLGA6L4A6NEF3 574 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 PODXLO00592 558 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 MBTPS2O43462 519 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 ACTN4O43707 911 aaKnown RBP15.75■□□□□ 0.11
FOXR1-202ENST00000531539 EPCAMP16422 314 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 ADSSP30520 456 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 PPP2R3AQ06190 1150 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 KCNC3Q14003 757 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 ENOX2Q16206 610 aaKnown RBP15.75■□□□□ 0.11
FOXR1-202ENST00000531539 CD300LGQ6UXG3 332 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 PPFIBP1Q86W92 1011 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 GLYCTKQ8IVS8 523 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 RNF168Q8IYW5 571 aaPredicted RBP15.75■□□□□ 0.11
FOXR1-202ENST00000531539 NOC3LQ8WTT2 800 aaKnown RBP15.75■□□□□ 0.11
FOXR1-202ENST00000531539 SLC22A17Q8WUG5 538 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 CASP10Q92851 521 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 TTPALQ9BTX7 342 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 PCIF1Q9H4Z3 704 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 TMEM206Q9H813 350 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 USP25Q9UHP3 1055 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 HCFC2Q9Y5Z7 792 aa15.75■□□□□ 0.11
FOXR1-202ENST00000531539 I3L4J1 428 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 TEX28O15482 410 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 TRAPPC3O43617 180 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 FAM189A1O60320 539 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 RPL17P18621 184 aaKnown RBP15.74■□□□□ 0.11
FOXR1-202ENST00000531539 RPL9P32969 192 aaKnown RBP15.74■□□□□ 0.11
FOXR1-202ENST00000531539 BRCC3P46736 316 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 ELAVL2Q12926 359 aaKnown RBP15.74■□□□□ 0.11
FOXR1-202ENST00000531539 FAM26FQ5R3K3 315 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 PRSS55Q6UWB4 352 aaPredicted RBP15.74■□□□□ 0.11
FOXR1-202ENST00000531539 PALB2Q86YC2 1186 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 CD302Q8IX05 232 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 TMEM130Q8N3G9 435 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 C12orf76Q8N812 135 aaPredicted RBP15.74■□□□□ 0.11
FOXR1-202ENST00000531539 FAM213AQ9BRX8 229 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 GOLPH3LQ9H4A5 285 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 RXFP1Q9HBX9 757 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 SLC39A2Q9NP94 309 aa15.74■□□□□ 0.11
FOXR1-202ENST00000531539 TRIP11Q15643 1979 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 FAM237AA0A1B0GTK4 181 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 GOLGA8IPA6NC78 632 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms