RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 LMNAP02545 664 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 BRCC3P46736 316 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 ARPP19P56211 112 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 RAB33AQ14088 237 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 ECM1Q16610 540 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 NPAS3Q8IXF0 933 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 CEP120Q8N960 986 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 DDX27Q96GQ7 796 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 TCHPQ9BT92 498 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 MRPL4Q9BYD3 311 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 CDT1Q9H211 546 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 SLC38A7Q9NVC3 462 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 TNFSF13BQ9Y275 285 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 MRPS23Q9Y3D9 190 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 NUB1Q9Y5A7 615 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 VPS13AQ96RL7 3174 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 PODXLO00592 558 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 HIP1RO75146 1068 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 LRG1P02750 347 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 ELF1P32519 619 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 GRM5P41594 1212 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 PFKPQ01813 784 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 MLF2Q15773 248 aaPredicted RBP17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 UPP1Q16831 310 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 KRT79Q5XKE5 535 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 C1orf210Q8IVY1 113 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 C3orf58Q8NDZ4 430 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 FBXO18Q8NFZ0 1043 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 DRC1Q96MC2 740 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 KMT5AQ9NQR1 393 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 ANKFY1Q9P2R3 1169 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 DNMT3BQ9UBC3 853 aaKnown RBP17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 DNM3Q9UQ16 869 aa17.35■□□□□ 0.37
CHMP4A-204ENST00000530996 SMIM28A0A1B0GU29 152 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 PP2D1A8MPX8 630 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 E9PMD0 336 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 LRRN2O75325 713 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 ID4P47928 161 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 NPTX2P47972 431 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 FOXK2Q01167 660 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 PTGDRQ13258 359 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 UVSSAQ2YD98 709 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 RSPO2Q6UXX9 243 aaPredicted RBP17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 TARS2Q9BW92 718 aaKnown RBP17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 BCO2Q9BYV7 579 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 SEMA4AQ9H3S1 761 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 SPATA6Q9NWH7 488 aaPredicted RBP17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 KCNH3Q9ULD8 1083 aa17.34■□□□□ 0.37
CHMP4A-204ENST00000530996 KANSL1LA0AUZ9 987 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 RHOP08100 348 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 POU2F2P09086 479 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 SP9P0CG40 484 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 IGFBP6P24592 240 aaPredicted RBP17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 MATR3P43243 847 aaKnown RBP eCLIP17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 ROR1Q01973 937 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 SOX4Q06945 474 aaPredicted RBP17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 STRN3Q13033 797 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 MCRS1Q96EZ8 462 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 ZSCAN31Q96LW9 406 aaPredicted RBP17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 ACO2Q99798 780 aaKnown RBP17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 RUSC1Q9BVN2 902 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 SH2B1Q9NRF2 756 aaPredicted RBP17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 BACE2Q9Y5Z0 518 aa17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 PTPRZ1P23471 2315 aaPredicted RBP17.33■□□□□ 0.36
CHMP4A-204ENST00000530996 SLC16A4O15374 487 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 LAMTOR5O43504 91 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 SEC24BO95487 1268 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 MCF2P10911 925 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 CEBPBP17676 345 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 MCM4P33991 863 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 STARD6P59095 220 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 PRKCQQ04759 706 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 RAD51AP2Q09MP3 1159 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 SLC44A4Q53GD3 710 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 VARS2Q5ST30 1063 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 MCTP1Q6DN14 999 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 MPZL3Q6UWV2 235 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 TPRG1Q6ZUI0 275 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 KIAA2013Q8IYS2 634 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 ELMOD1Q8N336 334 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 ACAP3Q96P50 834 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 CORO1BQ9BR76 489 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 CYP4F11Q9HBI6 524 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 DLGAP2Q9P1A6 1054 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 DAXXQ9UER7 740 aaPredicted RBP17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 PCDHB6Q9Y5E3 794 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 DOCK8Q8NF50 2099 aa17.32■□□□□ 0.36
CHMP4A-204ENST00000530996 H7C4K7 107 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 GLULP15104 373 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 CD72P21854 359 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 NOLC1Q14978 699 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 CTXN3Q4LDR2 81 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 IGSF22Q8N9C0 903 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 TMEM134Q9H6X4 195 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 ARHGAP28Q9P2N2 729 aa17.31■□□□□ 0.36
CHMP4A-204ENST00000530996 RIF1Q5UIP0 2472 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms