RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TRIM72Q6ZMU5 477 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 MCOLN2Q8IZK6 566 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 C3orf20Q8ND61 904 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 SLC7A3Q8WY07 619 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 GRHL1Q9NZI5 618 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 CHORDC1Q9UHD1 332 aaPredicted RBP18.42■□□□□ 0.54
BRCA2-204ENST00000530893 SLC12A6Q9UHW9 1150 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 PASKQ96RG2 1323 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 IGKV6D-21A0A0A0MT36 114 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 FAM170AA1A519 330 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 FSCN2O14926 492 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 MAPK4P31152 587 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 ARL2P36404 184 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 RFC5P40937 340 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 CDR1P51861 262 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 CENPCQ03188 943 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 KRT71Q3SY84 523 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 TTC27Q6P3X3 843 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 ZDHHC14Q8IZN3 488 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 DEPTORQ8TB45 409 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 FBXO25Q8TCJ0 367 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 FBXO40Q9UH90 709 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 SNX24Q9Y343 169 aa18.41■□□□□ 0.54
BRCA2-204ENST00000530893 K7ERI5 159 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 HLA-DRAP01903 254 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 CYP1A1P04798 512 aaPredicted RBP18.4■□□□□ 0.54
BRCA2-204ENST00000530893 HPDP32754 393 aaPredicted RBP18.4■□□□□ 0.54
BRCA2-204ENST00000530893 MAN1A1P33908 653 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 PPP2R2AP63151 447 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 SLMAPQ14BN4 828 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 SIX1Q15475 284 aaPredicted RBP18.4■□□□□ 0.54
BRCA2-204ENST00000530893 C10orf67Q8IYJ2 551 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 CCDC105Q8IYK2 499 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 VCPIP1Q96JH7 1222 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 PI4K2AQ9BTU6 479 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 ANAPC7Q9UJX3 599 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.4■□□□□ 0.54
BRCA2-204ENST00000530893 TELO2Q9Y4R8 837 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 ZBTB7AO95365 584 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 RARAP10276 462 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 ATP4AP20648 1035 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 PIK3CAP42336 1068 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 NSFP46459 744 aaKnown RBP18.4■□□□□ 0.54
BRCA2-204ENST00000530893 RPL21P46778 160 aaKnown RBP18.4■□□□□ 0.54
BRCA2-204ENST00000530893 SP2Q02086 613 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 SLC20A2Q08357 652 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 PTP4A2Q12974 167 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 ODF2Q5BJF6 829 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 DENND2CQ68D51 928 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 BTBD6Q96KE9 485 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 CNOT10Q9H9A5 744 aaKnown RBP18.4■□□□□ 0.54
BRCA2-204ENST00000530893 GGA2Q9UJY4 613 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 PPME1Q9Y570 386 aa18.4■□□□□ 0.54
BRCA2-204ENST00000530893 FAM107AO95990 144 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 PAEPP09466 180 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 POTEJP0CG39 1038 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 GLRA2P23416 452 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 TBXAS1P24557 533 aaPredicted RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 NLRP11P59045 1033 aaKnown RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 BYSLQ13895 437 aaKnown RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 TDRD10Q5VZ19 366 aaKnown RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 SMYD5Q6GMV2 418 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 SYDE1Q6ZW31 735 aaPredicted RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 MICALCLQ6ZW33 695 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 PGM2Q96G03 612 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 RBAKQ9NYW8 714 aaPredicted RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 ECEL1O95672 775 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 CRELD2Q6UXH1 353 aaPredicted RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 PPM1EQ8WY54 764 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 ART4Q93070 314 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 TMEM143Q96AN5 459 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 TLCD1Q96CP7 247 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 TMEM109Q9BVC6 243 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 EPB41L4BQ9H329 900 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 NRBP2Q9NSY0 501 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 BCCIPQ9P287 314 aaKnown RBP eCLIP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 NOVA2Q9UNW9 492 aaKnown RBP18.39■□□□□ 0.53
BRCA2-204ENST00000530893 CNTN6Q9UQ52 1028 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 FAM169AQ9Y6X4 670 aa18.39■□□□□ 0.53
BRCA2-204ENST00000530893 A0A087WUV0 522 aaPredicted RBP18.38■□□□□ 0.53
BRCA2-204ENST00000530893 A0A0B4J269 797 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 LRRIQ4A6NIV6 560 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 TRIM66O15016 1216 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 ACO1P21399 889 aaKnown RBP18.38■□□□□ 0.53
BRCA2-204ENST00000530893 AP3M2P53677 418 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 CUL2Q13617 745 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.38■□□□□ 0.53
BRCA2-204ENST00000530893 NLRP14Q86W24 1093 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 ASAP3Q8TDY4 903 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 CEP89Q96ST8 783 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 CGRRF1Q99675 332 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 MRPL47Q9HD33 250 aaKnown RBP18.38■□□□□ 0.53
BRCA2-204ENST00000530893 CD2APQ9Y5K6 639 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 MROH7Q68CQ1 1323 aa18.38■□□□□ 0.53
BRCA2-204ENST00000530893 RARGP13631 454 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 ACOT2P49753 483 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms