RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 C9IYK1 514 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MEFVO15553 781 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 EOMESO95936 686 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NFICP08651 508 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KRT19P08727 400 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ACRP10323 421 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ACTN1P12814 892 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ITGB8P26012 769 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PON1P27169 355 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PBX1P40424 430 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MLH1P40692 756 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PIK3CAP42336 1068 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CCDC173Q0VFZ6 552 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KCNMA1Q12791 1236 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LRMPQ12912 555 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TCTN1Q2MV58 587 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 WDR44Q5JSH3 913 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GLRA4Q5JXX5 417 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TDRD10Q5VZ19 366 aaKnown RBP9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CNKSR3Q6P9H4 555 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GLB1LQ6UWU2 654 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ALKAL1Q6UXT8 129 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 AGMOQ6ZNB7 445 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TRAPPC11Q7Z392 1133 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NT5DC4Q86YG4 428 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 EFCAB13Q8IY85 973 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CCDC150Q8NCX0 1101 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FBXL13Q8NEE6 735 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 BEST2Q8NFU1 509 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TAS1R2Q8TE23 839 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LINC01599Q8WXQ3 324 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 BADQ92934 168 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ERGIC2Q96RQ1 377 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RPS6KC1Q96S38 1066 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TSPAN18Q96SJ8 248 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GAD1Q99259 594 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 NUP58Q9BVL2 599 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MTMR12Q9C0I1 747 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CXCL16Q9H2A7 254 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RSAD1Q9HA92 442 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FAM207AQ9NSI2 230 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RAB20Q9NX57 234 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 DPP3Q9NY33 737 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GCNT4Q9P109 453 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 INPP5FQ9Y2H2 1132 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 DERAQ9Y315 318 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PTPRJQ12913 1337 aa9.19□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ARL5CA6NH57 179 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PMM2O15305 246 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 XPOTO43592 962 aaKnown RBP9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 HLA-DRAP01903 254 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KCNE1P15382 129 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SYN1P17600 705 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TRIM21P19474 475 aaKnown RBP9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 GUCY2FP51841 1108 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 RBP5P82980 135 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 APBA1Q02410 837 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FPGSQ05932 587 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PPIGQ13427 754 aaKnown RBP eCLIP9.18□□□□□ -0.946e-7■□□□□ 11.1
NEDD8-MDP1-201ENST00000530579 NCOA4Q13772 614 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZACNQ401N2 412 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 EPC2Q52LR7 807 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ITIH6Q6UXX5 1313 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 C15orf39Q6ZRI6 1047 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CACNA2D4Q7Z3S7 1137 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 URGCPQ8TCY9 931 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SEMA4DQ92854 862 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 C18orf25Q96B23 403 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZFP42Q96MM3 310 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZMAT2Q96NC0 199 aaKnown RBP9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LBHD1Q9BQE6 289 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 IL23AQ9NPF7 189 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 TMEM161AQ9NX61 479 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CNTN3Q9P232 1028 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PCDH10Q9P2E7 1040 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 IMPACTQ9P2X3 320 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ZMYND8Q9ULU4 1186 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 UBQLN1Q9UMX0 589 aaKnown RBP9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 AGAP1Q9UPQ3 857 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 SIK3Q9Y2K2 1263 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 C2CD2Q9Y426 696 aa9.18□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 KAT6AQ92794 2004 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 MYH11P35749 1972 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CEP350Q5VT06 3117 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ABHD14A-ACY1A0A1B0GW23 586 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 AKR1B15C9JRZ8 316 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 OFD1O75665 1012 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 UPP2O95045 317 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 VNN1O95497 513 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 CST3P01034 146 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 POMCP01189 267 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FGBP02675 491 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 AMHP03971 560 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ITGB3P05106 788 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 THP07101 528 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 PFKMP08237 780 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 FGFR1P11362 822 aa9.17□□□□□ -0.94
NEDD8-MDP1-201ENST00000530579 ATF7P17544 494 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms