RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 RNF139Q8WU17 664 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 KCNB2Q92953 911 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 CCDC17Q96LX7 622 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 KCNK16Q96T55 309 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 DHX35Q9H5Z1 703 aaKnown RBP8.04□□□□□ -1.12
CTNND1-223ENST00000529986 CASS4Q9NQ75 786 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 PDP2Q9P2J9 529 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 AFF4Q9UHB7 1163 aaKnown RBP8.04□□□□□ -1.12
CTNND1-223ENST00000529986 SLC12A6Q9UHW9 1150 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 DIP2CQ9Y2E4 1556 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 CDHR2Q9BYE9 1310 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 PSMD14O00487 310 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 XPOTO43592 962 aaKnown RBP8.04□□□□□ -1.12
CTNND1-223ENST00000529986 USPL1Q5W0Q7 1092 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 STOX1Q6ZVD7 989 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 USP49Q70CQ1 688 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 GUF1Q8N442 669 aaKnown RBP8.04□□□□□ -1.12
CTNND1-223ENST00000529986 SENP1Q9P0U3 644 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 LCMT1Q9UIC8 334 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 STK36Q9NRP7 1315 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 HEG1Q9ULI3 1381 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 GGPS1O95749 300 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 SRGNP10124 158 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 AKR1B1P15121 316 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 ZNF699Q32M78 642 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 TTC30BQ8N4P2 665 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 LRRN4CLQ8ND94 238 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 EPS8L3Q8TE67 593 aaKnown RBP8.04□□□□□ -1.12
CTNND1-223ENST00000529986 AGAP3Q96P47 875 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 EGFL8Q99944 293 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 MXD3Q9BW11 206 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 SH3GLB2Q9NR46 395 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 DONSONQ9NYP3 566 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 PSMC3IPQ9P2W1 217 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-223ENST00000529986 ZBTB1Q9Y2K1 713 aa8.04□□□□□ -1.12
CTNND1-223ENST00000529986 TMEM247A6NEH6 219 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ZBTB39O15060 712 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 KCNN4O15554 427 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ATMINO43313 823 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 APRTP07741 180 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ACADSP16219 412 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 CLK1P49759 484 aaKnown RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 KDM7AQ6ZMT4 941 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 METTL23Q86XA0 190 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 SLC44A5Q8NCS7 719 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 CPA5Q8WXQ8 436 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 MRPL1Q9BYD6 325 aaKnown RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 SLC5A4Q9NY91 659 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 PRDM4Q9UKN5 801 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 NRKQ7Z2Y5 1582 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 NME3Q13232 169 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 PTK7Q13308 1070 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 MXD4Q14582 209 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 MAPRE2Q15555 327 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 C6orf10Q5SRN2 563 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 IYDQ6PHW0 289 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 CLMNQ96JQ2 1002 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ISCUQ9H1K1 167 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 DTNAQ9Y4J8 743 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 NEXMIFQ5QGS0 1516 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 SMNDC1O75940 238 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 CCND2P30279 289 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 SDC4P31431 198 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ITGA8P53708 1063 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 TBCCQ15814 346 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 EZH2Q15910 746 aaKnown RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 FAM102AQ5T9C2 384 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 TTC33Q6PID6 262 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 MICU2Q8IYU8 434 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 USP38Q8NB14 1042 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 TMEM47Q9BQJ4 181 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 MANSC1Q9H8J5 431 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 BFARQ9NZS9 450 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 MTO1Q9Y2Z2 717 aaKnown RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 TYW5A2RUC4 315 aaKnown RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 DENND3A2RUS2 1198 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 C16orf96A6NNT2 1141 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ASAP2O43150 1006 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 TBC1D4O60343 1298 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 NBNO60934 754 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ATP6V1G2O95670 118 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 PSAPP07602 524 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 PLEKP08567 350 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 ALDH1B1P30837 517 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 IL6STP40189 918 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 KCTD21Q4G0X4 260 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 CEP78Q5JTW2 689 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 LRRC8BQ6P9F7 803 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 MIGA2Q7L4E1 593 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 IFT43Q96FT9 208 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 TMEM117Q9H0C3 514 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 FAM8A1Q9UBU6 413 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 XPO7Q9UIA9 1087 aaKnown RBP8.03□□□□□ -1.12
CTNND1-223ENST00000529986 CSADQ9Y600 493 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 DUSP10Q9Y6W6 482 aa8.03□□□□□ -1.12
CTNND1-223ENST00000529986 REREQ9P2R6 1566 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms