RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 LAMC3Q9Y6N6 1575 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 SMG6Q86US8 1419 aaKnown RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 IPO5O00410 1097 aaKnown RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 NRP2O60462 931 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 HMMRO75330 724 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 STC2O76061 302 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 FKBP9O95302 570 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 MAP2K2P36507 400 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 USP8P40818 1118 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 MANFP55145 182 aaKnown RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 CCT2P78371 535 aaKnown RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 MRPL49Q13405 166 aaKnown RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 MAP9Q49MG5 647 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 PLEKHG4Q58EX7 1191 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 CRB2Q5IJ48 1285 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 AP1ARQ63HQ0 302 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 FRMD7Q6ZUT3 714 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 FKBP9P1Q75LS8 142 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 DOK3Q7L591 496 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 CXorf67Q86X51 503 aaPredicted RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 ANKRD20A12PQ8NF67 263 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 HDAC7Q8WUI4 952 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 ATXN2LQ8WWM7 1075 aaKnown RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 NEU4Q8WWR8 484 aaPredicted RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 GAB3Q8WWW8 586 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 ANKRD7Q92527 254 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 CLIP3Q96DZ5 547 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 METTL14Q9HCE5 456 aaKnown RBP4.58□□□□□ -1.68
CTR9-205ENST00000529898 MAPRE3Q9UPY8 281 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 COMMD10Q9Y6G5 202 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 BCORL1Q5H9F3 1711 aa4.58□□□□□ -1.68
CTR9-205ENST00000529898 CROCC2H7BZ55 1655 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 ADGBQ8N7X0 1667 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 TCOF1Q13428 1488 aaKnown RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 NAIPQ13075 1403 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 A0A087X1B8 175 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 ST20-MTHFSA0A0A6YYL1 179 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 OVOL3O00110 214 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 KINO60870 393 aaKnown RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 PPFIA4O75335 1185 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 CDKL5O76039 1030 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 NBPF7P0C2Y1 421 aaPredicted RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 BPIP17213 487 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 PTGS2P35354 604 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 TRPC1P48995 793 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 PDIA5Q14554 519 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 SMN1Q16637 294 aaKnown RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 ATP2B3Q16720 1220 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 C19orf54Q5BKX5 351 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 GPRIN1Q7Z2K8 1008 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 RASSF3Q86WH2 238 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 KRT222Q8N1A0 295 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 TXLNBQ8N3L3 684 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 OR52N2Q8NGI0 321 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 SMCR8Q8TEV9 937 aaPredicted RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 PNISRQ8TF01 805 aaKnown RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 SLC25A43Q8WUT9 341 aaPredicted RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 C17orf50Q8WW18 174 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 HAS1Q92839 578 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 ARL8AQ96BM9 186 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 ZNF396Q96N95 335 aaPredicted RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 GPR101Q96P66 508 aaPredicted RBP4.57□□□□□ -1.68
CTR9-205ENST00000529898 ARPC5LQ9BPX5 153 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.57□□□□□ -1.68
CTR9-205ENST00000529898 EMC7Q9NPA0 242 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 TRPV5Q9NQA5 729 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 DIAPH3Q9NSV4 1193 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 PRSS50Q9UI38 385 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 PPP2R3BQ9Y5P8 575 aa4.57□□□□□ -1.68
CTR9-205ENST00000529898 TOPBP1Q92547 1522 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 POLA1P09884 1462 aaPredicted RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 KDRP35968 1356 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 NPC1L1Q9UHC9 1359 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 CGNL1Q0VF96 1302 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 TRIM24O15164 1050 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 FOXN1O15353 648 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 SH3BP5O60239 455 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 CFBP00751 764 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 GNAT2P19087 354 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 NR4A1P22736 598 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 CYP2C19P33261 490 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 PRPHP41219 470 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 EIF5P55010 431 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 INHBEP58166 350 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 NUCB2P80303 420 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 MEF2AQ02078 507 aaPredicted RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 IFT88Q13099 833 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 SART3Q15020 963 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 RBBP5Q15291 538 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 DHCR24Q15392 516 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 MRGPRGQ86SM5 289 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 NOP9Q86U38 636 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 FAM83AQ86UY5 434 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 IQCF2Q8IXL9 164 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 CCDC191Q8NCU4 936 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 TDRD7Q8NHU6 1098 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 TNPO1Q92973 898 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 TEKT1Q969V4 418 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 FERMT2Q96AC1 680 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 PDLIM2Q96JY6 352 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms