RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	MOV10L1	Q9BXT6	1211 aa	Known RBP	24.99	■■□□□ 1.59
GSDMD-208	ENST00000528475	NSRP1	Q9H0G5	558 aa	Known RBP	24.99	■■□□□ 1.59
GSDMD-208	ENST00000528475	YY1AP1	Q9H869	796 aa		24.99	■■□□□ 1.59
GSDMD-208	ENST00000528475	CHUK	O15111	745 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	MYCL	P12524	364 aa	Predicted RBP	24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	IVD	P26440	423 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	RTP1	P59025	263 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	EXOC3L1	Q86VI1	746 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	C1orf54	Q8WWF1	131 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	RMDN3	Q96TC7	470 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	PRMT1	Q99873	361 aa	Known RBP	24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	HOMER3	Q9NSC5	361 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	ZBTB12	Q9Y330	459 aa	Predicted RBP	24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	SCP2	P22307	547 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	SLCO1A2	P46721	670 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	BRDT	Q58F21	947 aa	Predicted RBP	24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	SGSM3	Q96HU1	749 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	SAMD15	Q9P1V8	674 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	MROH7	Q68CQ1	1323 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	MYPN	Q86TC9	1320 aa		24.98	■■□□□ 1.59
GSDMD-208	ENST00000528475	KRT5	P13647	590 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	ATP5D	P30049	168 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	CCDC25	Q86WR0	208 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	CCDC50	Q8IVM0	306 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	RTKN2	Q8IZC4	609 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	AGBL3	Q8NEM8	1001 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	DCLK3	Q9C098	648 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	HOMER2	Q9NSB8	354 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	PCDHA10	Q9Y5I2	948 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	DKC1	O60832	514 aa	Known RBP eCLIP	24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	TCEA3	O75764	348 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	BPIFB4	P59827	614 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	CLDN10	P78369	228 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	CENPC	Q03188	943 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	CYB5D1	Q6P9G0	228 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	CHST7	Q9NS84	486 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	GINM1	Q9NU53	330 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	ASIC3	Q9UHC3	531 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	PCDHB2	Q9Y5E7	798 aa		24.97	■■□□□ 1.59
GSDMD-208	ENST00000528475	STBD1	O95210	358 aa		24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	ABCD1	P33897	745 aa		24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	LARGE2	Q8N3Y3	721 aa		24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	DDX27	Q96GQ7	796 aa	Known RBP	24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	DDX23	Q9BUQ8	820 aa	Known RBP	24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	PDLIM7	Q9NR12	457 aa		24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	C1orf112	Q9NSG2	853 aa		24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	COL4A5	P29400	1685 aa		24.96	■■□□□ 1.59
GSDMD-208	ENST00000528475	SORBS3	O60504	671 aa		24.95	■■□□□ 1.59
GSDMD-208	ENST00000528475	GAS8	O95995	478 aa		24.95	■■□□□ 1.59
GSDMD-208	ENST00000528475	CYP1A1	P04798	512 aa	Predicted RBP	24.95	■■□□□ 1.59
GSDMD-208	ENST00000528475	BAG6	P46379	1132 aa		24.95	■■□□□ 1.59
GSDMD-208	ENST00000528475	GPRASP2	Q96D09	838 aa		24.95	■■□□□ 1.59
GSDMD-208	ENST00000528475	KIAA1586	Q9HCI6	787 aa		24.95	■■□□□ 1.59
GSDMD-208	ENST00000528475	HAUS2	Q9NVX0	235 aa		24.95	■■□□□ 1.59
GSDMD-208	ENST00000528475	ARID2	Q68CP9	1835 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	MAFG	O15525	162 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	TTC4	O95801	387 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	FDX1	P10109	184 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	ARHGEF16	Q5VV41	709 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	PARP9	Q8IXQ6	854 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	MCPH1	Q8NEM0	835 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	ATL2	Q8NHH9	583 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	MAGEC3	Q8TD91	643 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	IPO4	Q8TEX9	1081 aa	Known RBP	24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	CEP170P1	Q96L14	293 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	SLC12A4	Q9UP95	1085 aa		24.95	■■□□□ 1.58
GSDMD-208	ENST00000528475	TESPA1	A2RU30	521 aa	Predicted RBP	24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475		H0YCG3	227 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	RRM1	P23921	792 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	SNX1	Q13596	522 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	CHADL	Q6NUI6	762 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	NLRX1	Q86UT6	975 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	ATP6V0A1	Q93050	837 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	TRAIP	Q9BWF2	469 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	NEU2	Q9Y3R4	380 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	ADGRA3	Q8IWK6	1321 aa		24.94	■■□□□ 1.58
GSDMD-208	ENST00000528475	ZNF862	O60290	1169 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	PROSC	O94903	275 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	VIM	P08670	466 aa	Known RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	CHKA	P35790	457 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	LONRF1	Q17RB8	773 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	TRMT1L	Q7Z2T5	733 aa	Known RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	CCDC91	Q7Z6B0	441 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	ARHGEF2	Q92974	986 aa	Known RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	ELAC2	Q9BQ52	826 aa	Known RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	PI4K2A	Q9BTU6	479 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	PDGFD	Q9GZP0	370 aa	Predicted RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	HNRNPDL	O14979	420 aa	Known RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	PSTPIP1	O43586	416 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	ZBED4	O75132	1171 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	DGAT1	O75907	488 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	OAS1	P00973	400 aa	Known RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	ATF2	P15336	505 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	CCND2	P30279	289 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	ITGA8	P53708	1063 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	KLF1	Q13351	362 aa	Predicted RBP	24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	MON1B	Q7L1V2	547 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	VSIG10L	Q86VR7	867 aa		24.93	■■□□□ 1.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms