RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 MRPL44Q9H9J2 332 aaKnown RBP9.92□□□□□ -0.82
CMTM1-210ENST00000528441 RPF1Q9H9Y2 349 aaKnown RBP9.92□□□□□ -0.82
CMTM1-210ENST00000528441 GOLGA2P5Q9HBQ8 144 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 TBC1D7Q9P0N9 293 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 MUTYHQ9UIF7 546 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 FBXO2Q9UK22 296 aaPredicted RBP9.92□□□□□ -0.82
CMTM1-210ENST00000528441 HCN4Q9Y3Q4 1203 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 SPTBN5Q9NRC6 3674 aaKnown RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 PODXLO00592 558 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 PTGESO14684 152 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 TEX28O15482 410 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 SPATA31D3P0C874 917 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 MAPTP10636 758 aaKnown RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 PDIA4P13667 645 aaKnown RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 HOXB3P14651 431 aaPredicted RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 RFX1P22670 979 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 NMT1P30419 496 aaKnown RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 GBP2P32456 591 aaPredicted RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 DDIT3P35638 169 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 ME1P48163 572 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 CLCNKBP51801 687 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 NCKAP1LP55160 1127 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 SPAG1Q07617 926 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 BECN1Q14457 450 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 COL19A1Q14993 1142 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 PTPAQ15257 358 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 PDXDC1Q6P996 788 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 SYCE2Q6PIF2 218 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 PRSS55Q6UWB4 352 aaPredicted RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 ZPBP2Q6X784 338 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 SPATA31D4Q6ZUB0 917 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 RNF135Q8IUD6 432 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 TMEM161BQ8NDZ6 487 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 DHX58Q96C10 678 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 ACSF2Q96CM8 615 aaPredicted RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 PAAF1Q9BRP4 392 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 VN1R3Q9BXE9 311 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 GPR62Q9BZJ7 368 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 LRRC27Q9C0I9 530 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 ADAM7Q9H2U9 754 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 CD320Q9NPF0 282 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 FAM13BQ9NYF5 915 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 CDH22Q9UJ99 828 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 EXOC7Q9UPT5 735 aa9.91□□□□□ -0.82
CMTM1-210ENST00000528441 R3HCC1Q9Y3T6 440 aaKnown RBP9.91□□□□□ -0.82
CMTM1-210ENST00000528441 TRIP11Q15643 1979 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 SMIM28A0A1B0GU29 152 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 I3L4J1 428 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 INPPL1O15357 1258 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 F13A1P00488 732 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 ZSCAN22P10073 491 aaPredicted RBP9.9□□□□□ -0.82
CMTM1-210ENST00000528441 CXCL8P10145 99 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 COL9A1P20849 921 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 ELF1P32519 619 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 BRCC3P46736 316 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 CLCN4P51793 760 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 DSG1Q02413 1049 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 SLC39A14Q15043 492 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 KYAT1Q16773 422 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 ARSHQ5FYA8 562 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 HERC4Q5GLZ8 1057 aaPredicted RBP9.9□□□□□ -0.82
CMTM1-210ENST00000528441 PPM1LQ5SGD2 360 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 ADALQ6DHV7 355 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 KANK3Q6NY19 840 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 DSTYKQ6XUX3 929 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 TMEM184AQ6ZMB5 413 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 STXBP4Q6ZWJ1 553 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 USP49Q70CQ1 688 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 TAS1R3Q7RTX0 852 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 SFR1Q86XK3 245 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 CCDC65Q8IXS2 484 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 GSTCDQ8NEC7 633 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 POMGNT1Q8WZA1 660 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 SMG7Q92540 1137 aaKnown RBP9.9□□□□□ -0.82
CMTM1-210ENST00000528441 DDX12PQ92771 950 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 STAMQ92783 540 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 DDX27Q96GQ7 796 aaKnown RBP9.9□□□□□ -0.82
CMTM1-210ENST00000528441 SNX27Q96L92 541 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 POMKQ9H5K3 350 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 BLOC1S4Q9NUP1 217 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 CFAP45Q9UL16 551 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 TBX20Q9UMR3 447 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 IRAK3Q9Y616 596 aa9.9□□□□□ -0.82
CMTM1-210ENST00000528441 CUL9Q8IWT3 2517 aa9.9□□□□□ -0.83
CMTM1-210ENST00000528441 CCDC195A0A1B0GUA6 201 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 CUTAO60888 179 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 YEATS4O95619 227 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 CLTAP09496 248 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 GAP43P17677 238 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 SCP2P22307 547 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 ASIC1P78348 528 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 AMPD3Q01432 767 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 RTP2Q5QGT7 225 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 DCLRE1AQ6PJP8 1040 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.89□□□□□ -0.83
CMTM1-210ENST00000528441 GET4Q7L5D6 327 aaPredicted RBP9.89□□□□□ -0.83
CMTM1-210ENST00000528441 USP37Q86T82 979 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 KREMEN2Q8NCW0 462 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 BEST2Q8NFU1 509 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms