RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 USP20Q9Y2K6 914 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 TDRD15B5MCY1 1934 aaKnown RBP10.5□□□□□ -0.73
CHD7-208ENST00000528280 CCDC195A0A1B0GUA6 201 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 CASTOR2A6NHX0 329 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 XPOTO43592 962 aaKnown RBP10.49□□□□□ -0.73
CHD7-208ENST00000528280 GAP43P17677 238 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 MARCKSP29966 332 aaPredicted RBP10.49□□□□□ -0.73
CHD7-208ENST00000528280 LIG4P49917 911 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 POU5F1Q01860 360 aaKnown RBP10.49□□□□□ -0.73
CHD7-208ENST00000528280 MCL1Q07820 350 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 NOLC1Q14978 699 aaKnown RBP eCLIP10.49□□□□□ -0.73
CHD7-208ENST00000528280 KARSQ15046 597 aaKnown RBP10.49□□□□□ -0.73
CHD7-208ENST00000528280 NAB2Q15742 525 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 UPP1Q16831 310 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 UVSSAQ2YD98 709 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 TMC5Q6UXY8 1006 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.49□□□□□ -0.73
CHD7-208ENST00000528280 ANKS3Q6ZW76 656 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 OTOP3Q7RTS5 596 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 TAS1R3Q7RTX0 852 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 CEP57Q86XR8 500 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 CD302Q8IX05 232 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 ZDHHC14Q8IZN3 488 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 PIAS4Q8N2W9 510 aaPredicted RBP10.49□□□□□ -0.73
CHD7-208ENST00000528280 PIK3R5Q8WYR1 880 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 EPSTI1Q96J88 318 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 REEP2Q9BRK0 252 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 APOL5Q9BWW9 433 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 ST6GALNAC4Q9H4F1 302 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 ZHX3Q9H4I2 956 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 BLOC1S4Q9NUP1 217 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 ZDHHC7Q9NXF8 308 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 FBXO2Q9UK22 296 aaPredicted RBP10.49□□□□□ -0.73
CHD7-208ENST00000528280 TBX20Q9UMR3 447 aa10.49□□□□□ -0.73
CHD7-208ENST00000528280 NPHP3-ACAD11A0A0J9YXS1 232 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 H7C4K7 107 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 PPP6R2O75170 966 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 PAPLNO95428 1278 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 PIGRP01833 764 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 EDN1P05305 212 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 FGFR3P22607 806 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 NASPP49321 788 aaPredicted RBP10.48□□□□□ -0.73
CHD7-208ENST00000528280 CLCNKBP51801 687 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 OSTNP61366 133 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 ZXDAP98168 799 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 GTF2BQ00403 316 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 AMPD3Q01432 767 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 CEBPZQ03701 1054 aaKnown RBP10.48□□□□□ -0.73
CHD7-208ENST00000528280 POSTNQ15063 836 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 STK38Q15208 465 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 LILRA6Q6PI73 481 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 PALB2Q86YC2 1186 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 UBALD2Q8IYN6 164 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 C12orf76Q8N812 135 aaPredicted RBP10.48□□□□□ -0.73
CHD7-208ENST00000528280 TDRD5Q8NAT2 981 aaKnown RBP10.48□□□□□ -0.73
CHD7-208ENST00000528280 LNX1Q8TBB1 728 aaPredicted RBP10.48□□□□□ -0.73
CHD7-208ENST00000528280 NXPE3Q969Y0 559 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 OXCT2Q9BYC2 517 aaPredicted RBP10.48□□□□□ -0.73
CHD7-208ENST00000528280 IRF2BPLQ9H1B7 796 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 CUEDC2Q9H467 287 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 POMKQ9H5K3 350 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 FAM86C1Q9NVL1 165 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 CNTN3Q9P232 1028 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 MUTYHQ9UIF7 546 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 CFAP45Q9UL16 551 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 EXOC7Q9UPT5 735 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 BACE2Q9Y5Z0 518 aa10.48□□□□□ -0.73
CHD7-208ENST00000528280 MYO15AQ9UKN7 3530 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 PROB1E7EW31 1015 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 K7ENM7 598 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 ABLIM1O14639 778 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 HNRNPDLO14979 420 aaKnown RBP10.47□□□□□ -0.73
CHD7-208ENST00000528280 SYN3O14994 580 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 SPTLC2O15270 562 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 OGTO15294 1046 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 TGM5O43548 720 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 KIF4AO95239 1232 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 YEATS4O95619 227 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 HNRNPA1P09651 372 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHD7-208ENST00000528280 CYP3A5P20815 502 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 STAT6P42226 847 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 GRIN1Q05586 938 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 ALCAMQ13740 583 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 RAB33AQ14088 237 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 PSMD5Q16401 504 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 PTPN21Q16825 1174 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 SLC10A6Q3KNW5 377 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 TRIM67Q6ZTA4 783 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 CCDC149Q6ZUS6 474 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 ZNF720Q7Z2F6 126 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 LINC00301Q8NCQ3 95 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 KREMEN2Q8NCW0 462 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 APPL2Q8NEU8 664 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 RABGGTAQ92696 567 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 PBXIP1Q96AQ6 731 aa10.47□□□□□ -0.73
CHD7-208ENST00000528280 ZBTB45Q96K62 511 aaPredicted RBP10.47□□□□□ -0.73
CHD7-208ENST00000528280 USP28Q96RU2 1077 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms