RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RWDD2BP57060 319 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 NOL9Q5SY16 702 aaKnown RBP18.82■□□□□ 0.6
USH1C-205ENST00000527020 SPOPLQ6IQ16 392 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 MCOLN2Q8IZK6 566 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 C12orf50Q8NA57 414 aaPredicted RBP18.82■□□□□ 0.6
USH1C-205ENST00000527020 KIAA1586Q9HCI6 787 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 ZNF302Q9NR11 478 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 HOXC10Q9NYD6 342 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 AGO2Q9UKV8 859 aaKnown RBP18.82■□□□□ 0.6
USH1C-205ENST00000527020 MROH7Q68CQ1 1323 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 EBAG9O00559 213 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 ACO1P21399 889 aaKnown RBP18.81■□□□□ 0.6
USH1C-205ENST00000527020 STXBP2Q15833 593 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 ZBTB41Q5SVQ8 909 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 MAF1Q9H063 256 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 PODXLO00592 558 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 NDUFAB1O14561 156 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 SHBGP04278 402 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 ABCD1P33897 745 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 UBAP2Q5T6F2 1119 aaKnown RBP18.81■□□□□ 0.6
USH1C-205ENST00000527020 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 CPA5Q8WXQ8 436 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 RNF25Q96BH1 459 aaPredicted RBP18.81■□□□□ 0.6
USH1C-205ENST00000527020 FAM81BQ96LP2 452 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 PABPC3Q9H361 631 aaKnown RBP18.81■□□□□ 0.6
USH1C-205ENST00000527020 APOBEC3GQ9HC16 384 aaKnown RBP18.81■□□□□ 0.6
USH1C-205ENST00000527020 AVENQ9NQS1 362 aaPredicted RBP18.81■□□□□ 0.6
USH1C-205ENST00000527020 GGA3Q9NZ52 723 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 BCCIPQ9P287 314 aaKnown RBP eCLIP18.81■□□□□ 0.6
USH1C-205ENST00000527020 ANAPC7Q9UJX3 599 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 NOVA2Q9UNW9 492 aaKnown RBP18.81■□□□□ 0.6
USH1C-205ENST00000527020 PCDHB2Q9Y5E7 798 aa18.81■□□□□ 0.6
USH1C-205ENST00000527020 LRRC37A2A6NM11 1700 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 IGKV6D-21A0A0A0MT36 114 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 CYP1A1P04798 512 aaPredicted RBP18.8■□□□□ 0.6
USH1C-205ENST00000527020 NUDT17P0C025 328 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 TNNI1P19237 187 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 RRM1P23921 792 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 NAMPTP43490 491 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 KCNJ1P48048 391 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 SEC24CP53992 1094 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 PMS2P54278 862 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 STRN3Q13033 797 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 KRT71Q3SY84 523 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 ARFGAP2Q8N6H7 521 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 FNBP1Q96RU3 617 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 PCYT2Q99447 389 aa18.8■□□□□ 0.6
USH1C-205ENST00000527020 FSCN2O14926 492 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 CLDN3O15551 220 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 CFHP08603 1231 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 SCP2P22307 547 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 PIK3CAP42336 1068 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 SH3D19Q5HYK7 790 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 SEPT14Q6ZU15 432 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 ZNF677Q86XU0 584 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 DNERQ8NFT8 737 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.79■□□□□ 0.6
USH1C-205ENST00000527020 TLCD1Q96CP7 247 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 NIFKQ9BYG3 293 aaKnown RBP18.79■□□□□ 0.6
USH1C-205ENST00000527020 MTUS1Q9ULD2 1270 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 LRRIQ4A6NIV6 560 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 ERLIN2O94905 339 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 MAPK4P31152 587 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 FNTAP49354 379 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 HIRAP54198 1017 aaPredicted RBP18.79■□□□□ 0.6
USH1C-205ENST00000527020 EIF3BP55884 814 aaKnown RBP18.79■□□□□ 0.6
USH1C-205ENST00000527020 PPP2R2AP63151 447 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 PPARDQ03181 441 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 CENPCQ03188 943 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 LLGL1Q15334 1064 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 C2CD6Q53TS8 623 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 WDR44Q5JSH3 913 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 SCARA3Q6AZY7 606 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 PHLDB2Q86SQ0 1253 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 CHST13Q8NET6 341 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 TARS2Q9BW92 718 aaKnown RBP18.79■□□□□ 0.6
USH1C-205ENST00000527020 RASSF4Q9H2L5 321 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 LRRC19Q9H756 370 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 KCNG1Q9UIX4 513 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 FAM169AQ9Y6X4 670 aa18.79■□□□□ 0.6
USH1C-205ENST00000527020 ADGRA2Q96PE1 1338 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 CNTNAP2Q9UHC6 1331 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 A0A0B4J269 797 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 GSTTP1A0A1W2PQM5 241 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 SRRM3A6NNA2 597 aaPredicted RBP18.78■□□□□ 0.6
USH1C-205ENST00000527020 K7ERI5 159 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 ALDH5A1P51649 535 aaPredicted RBP18.78■□□□□ 0.6
USH1C-205ENST00000527020 MAGOHP61326 146 aaKnown RBP18.78■□□□□ 0.6
USH1C-205ENST00000527020 TREML2Q5T2D2 321 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 MON1BQ7L1V2 547 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 CCDC105Q8IYK2 499 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 DEPTORQ8TB45 409 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 MYCBPAPQ8TBZ2 947 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 ZNF473Q8WTR7 871 aaKnown RBP18.78■□□□□ 0.6
USH1C-205ENST00000527020 CYFIP2Q96F07 1278 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 HERPUD2Q9BSE4 406 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 TSPYL1Q9H0U9 437 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 RBAKQ9NYW8 714 aaPredicted RBP18.78■□□□□ 0.6
USH1C-205ENST00000527020 PTPN22Q9Y2R2 807 aa18.78■□□□□ 0.6
USH1C-205ENST00000527020 PAPPA2Q9BXP8 1791 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms