RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 YBX3P16989 372 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 PTGIRP43119 386 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 DMP1Q13316 513 aaPredicted RBP12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 NFIL3Q16649 462 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 SV2AQ7L0J3 742 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 APOBEC3FQ8IUX4 373 aaKnown RBP12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 VPS33BQ9H267 617 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 RPTORQ8N122 1335 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 COL11A1P12107 1806 aaPredicted RBP12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 GOLGA6L7A0A1B0GV03 622 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 PLA2G6O60733 806 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 CSDE1O75534 798 aaKnown RBP12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 CHN1P15882 459 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 CCND2P30279 289 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 PEX5P50542 639 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 PDE6CP51160 858 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 MFAP3P55082 362 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 FAM71AQ8IYT1 594 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 TMEM130Q8N3G9 435 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 TMEM161BQ8NDZ6 487 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 PARD3BQ8TEW8 1205 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 HERPUD2Q9BSE4 406 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 ASIC3Q9UHC3 531 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 UBE4BO95155 1302 aa12.8□□□□□ -0.36
CHMP1B-201ENST00000526991 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 GJB1P08034 283 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 WNT7BP56706 349 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 ACTR2P61160 394 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 PSMC5P62195 406 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 GTF2BQ00403 316 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 PRKCEQ02156 737 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 BIRC3Q13489 604 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 LY6KQ17RY6 165 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 HP1BP3Q5SSJ5 553 aaPredicted RBP12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 C9orf131Q5VYM1 1079 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 KRT39Q6A163 491 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 SLC39A4Q6P5W5 647 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 CCDC50Q8IVM0 306 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 CCDC114Q96M63 670 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 NT5C1BQ96P26 610 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 ACAD9Q9H845 621 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 JPH1Q9HDC5 661 aaPredicted RBP12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 CHST7Q9NS84 486 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 RASAL2Q9UJF2 1139 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 AFG3L2Q9Y4W6 797 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 PCDHA10Q9Y5I2 948 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 CSADQ9Y600 493 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 KIAA1217Q5T5P2 1943 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 TRAPPC3O43617 180 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 CREB1P16220 341 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 TNNI1P19237 187 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 HNRNPH1P31943 449 aaKnown RBP12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 MNAT1P51948 309 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 SMTNP53814 917 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 DRP2Q13474 957 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 FAM182AQ5T1J6 154 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 SLC13A5Q86YT5 568 aaPredicted RBP12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 GPC2Q8N158 579 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 REPS2Q8NFH8 660 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 HELQQ8TDG4 1101 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 ZBTB45Q96K62 511 aaPredicted RBP12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 PABPC3Q9H361 631 aaKnown RBP12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 RAB20Q9NX57 234 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 SSC5DA1L4H1 1573 aa12.79□□□□□ -0.36
CHMP1B-201ENST00000526991 SYNGAP1Q96PV0 1343 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 PPP1R12AO14974 1030 aaPredicted RBP12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 RRM1P23921 792 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 CCDC121Q6ZUS5 278 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 COPS5Q92905 334 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 SEC16BQ96JE7 1060 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 MOV10L1Q9BXT6 1211 aaKnown RBP12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 TXNRD2Q9NNW7 524 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 TBC1D22BQ9NU19 505 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 CTNNAL1Q9UBT7 734 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 TBK1Q9UHD2 729 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 LRRIQ4A6NIV6 560 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 NEBLO76041 1014 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 CYP2C8P10632 490 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 MAPK4P31152 587 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 COILP38432 576 aaPredicted RBP12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 Q3C1V9 767 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 KCNV1Q6PIU1 500 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 FBXL13Q8NEE6 735 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 PRMT1Q99873 361 aaKnown RBP12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 TTC7AQ9ULT0 858 aaPredicted RBP12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 PFASO15067 1338 aa12.78□□□□□ -0.36
CHMP1B-201ENST00000526991 BHMG1C9JSJ3 638 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms