RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 VPS36Q86VN1 386 aa22.11■■□□□ 1.13
SMCO4-203ENST00000526869 PPM1KQ8N3J5 372 aa22.11■■□□□ 1.13
SMCO4-203ENST00000526869 ARRDC4Q8NCT1 418 aa22.11■■□□□ 1.13
SMCO4-203ENST00000526869 ANKRD36BP1Q96IX9 119 aa22.11■■□□□ 1.13
SMCO4-203ENST00000526869 KREMEN1Q96MU8 473 aa22.11■■□□□ 1.13
SMCO4-203ENST00000526869 CCDC94Q9BW85 323 aaPredicted RBP22.11■■□□□ 1.13
SMCO4-203ENST00000526869 SEZ6LQ9BYH1 1024 aa22.11■■□□□ 1.13
SMCO4-203ENST00000526869 HAUS4Q9H6D7 363 aa22.11■■□□□ 1.13
SMCO4-203ENST00000526869 ATP8B3O60423 1300 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 ZNF263O14978 683 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 PHACTR2O75167 634 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 LRRN2O75325 713 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 HSPA6P17066 643 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 FGFR4P22455 802 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 VAV2P52735 878 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 ETF1P62495 437 aaKnown RBP22.1■■□□□ 1.13
SMCO4-203ENST00000526869 ARID5AQ03989 594 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 PTK2Q05397 1052 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 PTK7Q13308 1070 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 NCOA4Q13772 614 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 ARHGAP44Q17R89 818 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 ARHGAP29Q52LW3 1261 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 C10orf76Q5T2E6 689 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 TRAPPC11Q7Z392 1133 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 FAM71AQ8IYT1 594 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 TMEM40Q8WWA1 233 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 GLT1D1Q96MS3 346 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 ACAP3Q96P50 834 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 TSGA10Q9BZW7 698 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMCO4-203ENST00000526869 PLEKHA5Q9HAU0 1116 aa22.1■■□□□ 1.13
SMCO4-203ENST00000526869 FOXN3O00409 490 aaPredicted RBP22.09■■□□□ 1.13
SMCO4-203ENST00000526869 CAND2O75155 1236 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 TMEM191BP0C7N4 346 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 ARHGAP25P42331 645 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 OSTNP61366 133 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 PTGISQ16647 500 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 ZNF571Q7Z3V5 609 aaPredicted RBP22.09■■□□□ 1.13
SMCO4-203ENST00000526869 KIAA1328Q86T90 577 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 EFCAB13Q8IY85 973 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 TMEM192Q8IY95 271 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 TAF4BQ92750 862 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 FAM212AQ96EL1 285 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 SYT11Q9BT88 431 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 IMPG2Q9BZV3 1241 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 MTMR12Q9C0I1 747 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 SENP6Q9GZR1 1112 aaPredicted RBP22.09■■□□□ 1.13
SMCO4-203ENST00000526869 MYO1AQ9UBC5 1043 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 PTPN22Q9Y2R2 807 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 DERAQ9Y315 318 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 C2CD2Q9Y426 696 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 CDY2AQ9Y6F7 541 aa22.09■■□□□ 1.13
SMCO4-203ENST00000526869 LACTBL1A8MY62 500 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 TULP1O00294 542 aaPredicted RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 NPTXRO95502 500 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 ASS1P00966 412 aaKnown RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 MYCNP04198 464 aaPredicted RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 TBXAS1P24557 533 aaPredicted RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 MGAT3Q09327 533 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 BMS1Q14692 1282 aaKnown RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 SLC10A6Q3KNW5 377 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 SLC43A3Q8NBI5 491 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 DHX38Q92620 1227 aaKnown RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 FAXDC2Q96IV6 333 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 TSPAN18Q96SJ8 248 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 IFIH1Q9BYX4 1025 aaKnown RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 WBP1LQ9NX94 342 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 NENFQ9UMX5 172 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 PHF24Q9UPV7 400 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 PIN4Q9Y237 131 aaKnown RBP22.08■■□□□ 1.13
SMCO4-203ENST00000526869 PCDHA13Q9Y5I0 950 aa22.08■■□□□ 1.13
SMCO4-203ENST00000526869 MEFVO15553 781 aaPredicted RBP22.07■■□□□ 1.12
SMCO4-203ENST00000526869 PJA2O43164 708 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 KIF5CO60282 957 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 TFAMQ00059 246 aaKnown RBP22.07■■□□□ 1.12
SMCO4-203ENST00000526869 SGSM1Q2NKQ1 1148 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 FAM228AQ86W67 206 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 KAT5Q92993 513 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 TATDN2Q93075 761 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 FAM84AQ96KN4 292 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 LZTFL1Q9NQ48 299 aa22.07■■□□□ 1.12
SMCO4-203ENST00000526869 A0A087X0T9 212 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 KRT86O43790 486 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 FAM228BP0C875 321 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 PNMA6AP0CW24 399 aaPredicted RBP22.06■■□□□ 1.12
SMCO4-203ENST00000526869 MAGEA1P43355 309 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 NOP14P78316 857 aaKnown RBP22.06■■□□□ 1.12
SMCO4-203ENST00000526869 CYP27A1Q02318 531 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 GFPT1Q06210 699 aaPredicted RBP22.06■■□□□ 1.12
SMCO4-203ENST00000526869 KIF5AQ12840 1032 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 CUL2Q13617 745 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 FAM26DQ5JW98 314 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 WNT8BQ93098 351 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 PI4K2AQ9BTU6 479 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 CHST12Q9NRB3 414 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 TSKSQ9UJT2 592 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 NOC2LQ9Y3T9 749 aaKnown RBP22.06■■□□□ 1.12
SMCO4-203ENST00000526869 PAXBP1Q9Y5B6 917 aa22.06■■□□□ 1.12
SMCO4-203ENST00000526869 A0A0U1RQG5 324 aaPredicted RBP22.05■■□□□ 1.12
SMCO4-203ENST00000526869 A0A1W2PQ45 241 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms