RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 CD300LGQ6UXG3 332 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 NOSTRINQ8IVI9 506 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 MAML2Q8IZL2 1156 aaPredicted RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 C4orf32Q8N8J7 132 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 FBXO18Q8NFZ0 1043 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 ZNF461Q8TAF7 563 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 DEPTORQ8TB45 409 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 NELL1Q92832 810 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 CLDN23Q96B33 292 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 DDX27Q96GQ7 796 aaKnown RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 IFT74Q96LB3 600 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 NELL2Q99435 816 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 NTPCRQ9BSD7 190 aaKnown RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 TRPV5Q9NQA5 729 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 TOPORSQ9NS56 1045 aaPredicted RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 SLC38A7Q9NVC3 462 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 RBM19Q9Y4C8 960 aaKnown RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 STK25O00506 426 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 LAD1O00515 517 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 SYN3O14994 580 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 SPTLC1O15269 473 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 ADAM12O43184 909 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 B3GAT3O94766 335 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 KCNE1P15382 129 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 RFX1P22670 979 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 PROZP22891 400 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 NEK4P51957 841 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 GPC5P78333 572 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 HMGN5P82970 282 aaKnown RBP10.33□□□□□ -0.76
SDC2-207ENST00000522911 MRPL58Q14197 206 aaKnown RBP10.33□□□□□ -0.76
SDC2-207ENST00000522911 MLF2Q15773 248 aaPredicted RBP10.33□□□□□ -0.76
SDC2-207ENST00000522911 PABPC1LQ4VXU2 614 aaKnown RBP10.33□□□□□ -0.76
SDC2-207ENST00000522911 SLC44A4Q53GD3 710 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 EEF1DP3Q658K8 133 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 GLYCTKQ8IVS8 523 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 TCEAL8Q8IYN2 117 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 SUMF1Q8NBK3 374 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 SLC7A14Q8TBB6 771 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 RUBCNQ92622 972 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 ACO2Q99798 780 aaKnown RBP10.33□□□□□ -0.76
SDC2-207ENST00000522911 IER2Q9BTL4 223 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 RPP25Q9BUL9 199 aaKnown RBP10.33□□□□□ -0.76
SDC2-207ENST00000522911 TIPINQ9BVW5 301 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 ARHGAP28Q9P2N2 729 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 DNMT3BQ9UBC3 853 aaKnown RBP10.33□□□□□ -0.76
SDC2-207ENST00000522911 CACNG4Q9UBN1 327 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 KCNG1Q9UIX4 513 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 PCDHGA2Q9Y5H1 932 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 VWA8A3KMH1 1905 aa10.33□□□□□ -0.76
SDC2-207ENST00000522911 A0A087WWV3 80 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 SMIM28A0A1B0GU29 152 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 K7ERI5 159 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 ABLIM1O14639 778 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 CCL16O15467 120 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 DCNP07585 359 aaKnown RBP10.32□□□□□ -0.76
SDC2-207ENST00000522911 ATF2P15336 505 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 U2AF2P26368 475 aaKnown RBP eCLIP10.32□□□□□ -0.762e-6■■■■□ 19.7
SDC2-207ENST00000522911 RPL9P32969 192 aaKnown RBP10.32□□□□□ -0.76
SDC2-207ENST00000522911 PRPHP41219 470 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 CLCNKBP51801 687 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 TPGS2Q68CL5 300 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 MAEAQ7L5Y9 396 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 CEP57Q86XR8 500 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 ZBTB44Q8NCP5 570 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 ITFG1Q8TB96 612 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 HASPINQ8TF76 798 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 RABGGTAQ92696 567 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 DNASE1L2Q92874 299 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 ELSPBP1Q96BH3 223 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 C8orf76Q96K31 380 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 OXCT2Q9BYC2 517 aaPredicted RBP10.32□□□□□ -0.76
SDC2-207ENST00000522911 FAM126AQ9BYI3 521 aaPredicted RBP10.32□□□□□ -0.76
SDC2-207ENST00000522911 BCO2Q9BYV7 579 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 RAB34Q9BZG1 259 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 CXCL16Q9H2A7 254 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 BHMT2Q9H2M3 363 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 CNTN3Q9P232 1028 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 LIMCH1Q9UPQ0 1083 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 CDY1Q9Y6F8 540 aa10.32□□□□□ -0.76
SDC2-207ENST00000522911 NOTCH4Q99466 2003 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 NCAM2O15394 837 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 DTNBO60941 627 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 RHOP08100 348 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 MCF2P10911 925 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 SCP2P22307 547 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 TKTP29401 623 aaKnown RBP10.31□□□□□ -0.76
SDC2-207ENST00000522911 NPTX2P47972 431 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 YARSP54577 528 aaKnown RBP10.31□□□□□ -0.76
SDC2-207ENST00000522911 EPHA5P54756 1037 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 MLLT6P55198 1093 aaPredicted RBP10.31□□□□□ -0.76
SDC2-207ENST00000522911 NTHL1P78549 312 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 ROR1Q01973 937 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 ECM1Q16610 540 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 TTC38Q5R3I4 469 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 DAW1Q8N136 415 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 ZNF687Q8N1G0 1237 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 GPR161Q8N6U8 529 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms