RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 EPC2Q52LR7 807 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 PLEKHG4Q58EX7 1191 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 SMG8Q8ND04 991 aaKnown RBP14.13□□□□□ -0.15
CPNE3-205ENST00000522240 TTYH3Q9C0H2 523 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 WNT8AQ9H1J5 351 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 TMEM39AQ9NV64 488 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 SNTG2Q9NY99 539 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 CNTN3Q9P232 1028 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 C2CD2Q9Y426 696 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 IPPQ9Y573 584 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 PTPRJQ12913 1337 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 UMODL1Q5DID0 1318 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 A0A1W2PQJ5 194 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 KIAA0355O15063 1070 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 MEFVO15553 781 aaPredicted RBP14.12□□□□□ -0.15
CPNE3-205ENST00000522240 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
CPNE3-205ENST00000522240 MGEA5O60502 916 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 NBNO60934 754 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 ZNF623O75123 536 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 C4BPAP04003 597 aaKnown RBP14.12□□□□□ -0.15
CPNE3-205ENST00000522240 GYPCP04921 128 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 TPM1P09493 284 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 TMEM191BP0C7N4 346 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 RFX1P22670 979 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 DEKP35659 375 aaKnown RBP14.12□□□□□ -0.15
CPNE3-205ENST00000522240 KCNMA1Q12791 1236 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 XKR4Q5GH76 650 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 SV2AQ7L0J3 742 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 MRPL10Q7Z7H8 261 aaKnown RBP14.12□□□□□ -0.15
CPNE3-205ENST00000522240 EFCAB13Q8IY85 973 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 SPC24Q8NBT2 197 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 CCDC150Q8NCX0 1101 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 FBXL13Q8NEE6 735 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 NEK11Q8NG66 645 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 SEPT8Q92599 483 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 ANKRD36BP1Q96IX9 119 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 HTATIP2Q9BUP3 242 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 LSM14BQ9BX40 385 aaKnown RBP14.12□□□□□ -0.15
CPNE3-205ENST00000522240 EDEM3Q9BZQ6 932 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 MMRN2Q9H8L6 949 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 C1orf112Q9NSG2 853 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 FBXL5Q9UKA1 691 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 PCDHB2Q9Y5E7 798 aa14.12□□□□□ -0.15
CPNE3-205ENST00000522240 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.12□□□□□ -0.15
CPNE3-205ENST00000522240 ALPK3Q96L96 1907 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 A0A0U1RQF3 1178 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 LACTBL1A8MY62 500 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 HAX1O00165 279 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 ZC3H11AO75152 810 aaKnown RBP eCLIP14.11□□□□□ -0.15
CPNE3-205ENST00000522240 TNNC2P02585 160 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 TRIM21P19474 475 aaKnown RBP14.11□□□□□ -0.15
CPNE3-205ENST00000522240 PON1P27169 355 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 GPNMBQ14956 572 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 TMEM132DQ14C87 1099 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 TDRD10Q5VZ19 366 aaKnown RBP14.11□□□□□ -0.15
CPNE3-205ENST00000522240 TRIM65Q6PJ69 517 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 PPFIBP1Q86W92 1011 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 CNGA4Q8IV77 575 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 ZNF516Q92618 1163 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 PGBD4Q96DM1 585 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
CPNE3-205ENST00000522240 POP1Q99575 1024 aaKnown RBP14.11□□□□□ -0.15
CPNE3-205ENST00000522240 ADAM2Q99965 735 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 PPP1R12CQ9BZL4 782 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 MTMR12Q9C0I1 747 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 INTS2Q9H0H0 1204 aaKnown RBP14.11□□□□□ -0.15
CPNE3-205ENST00000522240 GANQ9H2C0 597 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 RGS18Q9NS28 235 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 GIT1Q9Y2X7 761 aa14.11□□□□□ -0.15
CPNE3-205ENST00000522240 XPOTO43592 962 aaKnown RBP14.1□□□□□ -0.15
CPNE3-205ENST00000522240 MFAP3LO75121 409 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 PTMAP06454 111 aaKnown RBP14.1□□□□□ -0.15
CPNE3-205ENST00000522240 NFICP08651 508 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 ITGA4P13612 1032 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 KCNE1P15382 129 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 PIK3CAP42336 1068 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 KLK7P49862 253 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 PTPN21Q16825 1174 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 PPP1R15BQ5SWA1 713 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 LMBRD2Q68DH5 695 aaPredicted RBP14.1□□□□□ -0.15
CPNE3-205ENST00000522240 JADE1Q6IE81 842 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 DPY19L2P1Q6NXN4 242 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 ALKAL1Q6UXT8 129 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 ECHDC2Q86YB7 292 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 OR5B17Q8NGF7 314 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 LMO3Q8TAP4 145 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 CACTINQ8WUQ7 758 aaKnown RBP14.1□□□□□ -0.15
CPNE3-205ENST00000522240 LINC01599Q8WXQ3 324 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 DPF3Q92784 378 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 CRACR2AQ9BSW2 395 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 UBN1Q9NPG3 1134 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 FAM207AQ9NSI2 230 aaPredicted RBP14.1□□□□□ -0.15
CPNE3-205ENST00000522240 RAB20Q9NX57 234 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 CEP72Q9P209 647 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 HES2Q9Y543 173 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 NR2E3Q9Y5X4 410 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 LTBP2Q14767 1821 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 SCN5AQ14524 2016 aa14.1□□□□□ -0.15
CPNE3-205ENST00000522240 C9IYK1 514 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms